Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.04■■■□□ 2.08
FOXR1Q6PIV2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
FOXR1Q6PIV2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.02■■■□□ 2.08
FOXR1Q6PIV2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC28.02■■■□□ 2.08
FOXR1Q6PIV2 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
FOXR1Q6PIV2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC27.99■■■□□ 2.07
FOXR1Q6PIV2 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
FOXR1Q6PIV2 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC27.98■■■□□ 2.07
FOXR1Q6PIV2 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
FOXR1Q6PIV2 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
FOXR1Q6PIV2 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC27.97■■■□□ 2.07
FOXR1Q6PIV2 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
FOXR1Q6PIV2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
FOXR1Q6PIV2 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
FOXR1Q6PIV2 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXR1Q6PIV2 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC27.96■■■□□ 2.07
FOXR1Q6PIV2 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
FOXR1Q6PIV2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
FOXR1Q6PIV2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.94■■■□□ 2.06
FOXR1Q6PIV2 ANXA5-201ENST00000296511 1762 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
FOXR1Q6PIV2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
FOXR1Q6PIV2 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR1Q6PIV2 TWIST1-201ENST00000242261 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR1Q6PIV2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC27.92■■■□□ 2.06
FOXR1Q6PIV2 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
FOXR1Q6PIV2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
FOXR1Q6PIV2 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
FOXR1Q6PIV2 AC135731.1-201ENST00000569415 2548 ntBASIC27.91■■■□□ 2.06
FOXR1Q6PIV2 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC27.91■■■□□ 2.06
FOXR1Q6PIV2 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC27.91■■■□□ 2.06
FOXR1Q6PIV2 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC27.9■■■□□ 2.06
FOXR1Q6PIV2 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXR1Q6PIV2 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXR1Q6PIV2 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC27.9■■■□□ 2.06
FOXR1Q6PIV2 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC27.89■■■□□ 2.06
FOXR1Q6PIV2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC27.88■■■□□ 2.05
FOXR1Q6PIV2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.88■■■□□ 2.05
FOXR1Q6PIV2 RARRES2P7-201ENST00000567349 469 ntBASIC27.87■■■□□ 2.05
FOXR1Q6PIV2 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC27.86■■■□□ 2.05
FOXR1Q6PIV2 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
FOXR1Q6PIV2 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
FOXR1Q6PIV2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
FOXR1Q6PIV2 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.86■■■□□ 2.05
FOXR1Q6PIV2 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
FOXR1Q6PIV2 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.85■■■□□ 2.05
FOXR1Q6PIV2 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.84■■■□□ 2.05
FOXR1Q6PIV2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
FOXR1Q6PIV2 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
FOXR1Q6PIV2 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
FOXR1Q6PIV2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
FOXR1Q6PIV2 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC27.82■■■□□ 2.04
FOXR1Q6PIV2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
FOXR1Q6PIV2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
FOXR1Q6PIV2 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.78■■■□□ 2.04
FOXR1Q6PIV2 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC27.78■■■□□ 2.04
FOXR1Q6PIV2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC27.77■■■□□ 2.04
FOXR1Q6PIV2 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC27.77■■■□□ 2.04
FOXR1Q6PIV2 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
FOXR1Q6PIV2 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
FOXR1Q6PIV2 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.76■■■□□ 2.03
FOXR1Q6PIV2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
FOXR1Q6PIV2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC27.76■■■□□ 2.03
FOXR1Q6PIV2 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
FOXR1Q6PIV2 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
FOXR1Q6PIV2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
FOXR1Q6PIV2 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.74■■■□□ 2.03
FOXR1Q6PIV2 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
FOXR1Q6PIV2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
FOXR1Q6PIV2 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.71■■■□□ 2.03
FOXR1Q6PIV2 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC27.71■■■□□ 2.03
FOXR1Q6PIV2 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
FOXR1Q6PIV2 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.69■■■□□ 2.02
FOXR1Q6PIV2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.68■■■□□ 2.02
FOXR1Q6PIV2 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
FOXR1Q6PIV2 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
FOXR1Q6PIV2 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC27.67■■■□□ 2.02
FOXR1Q6PIV2 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC27.67■■■□□ 2.02
FOXR1Q6PIV2 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
FOXR1Q6PIV2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC27.66■■■□□ 2.02
FOXR1Q6PIV2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
FOXR1Q6PIV2 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
FOXR1Q6PIV2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.65■■■□□ 2.02
FOXR1Q6PIV2 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC27.65■■■□□ 2.02
FOXR1Q6PIV2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
FOXR1Q6PIV2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.64■■■□□ 2.02
FOXR1Q6PIV2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
FOXR1Q6PIV2 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
FOXR1Q6PIV2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC27.63■■■□□ 2.01
FOXR1Q6PIV2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.62■■■□□ 2.01
FOXR1Q6PIV2 AC097358.2-201ENST00000607541 1159 ntBASIC27.62■■■□□ 2.01
FOXR1Q6PIV2 VPS37D-201ENST00000324941 1624 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR1Q6PIV2 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
FOXR1Q6PIV2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.6■■■□□ 2.01
FOXR1Q6PIV2 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
FOXR1Q6PIV2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
FOXR1Q6PIV2 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
FOXR1Q6PIV2 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC27.59■■■□□ 2.01
FOXR1Q6PIV2 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
FOXR1Q6PIV2 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC27.59■■■□□ 2.01
FOXR1Q6PIV2 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC27.58■■■□□ 2.01
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms