Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 YNL115CYNL115C 1935 nt8.91□□□□□ -0.98
SSN8P47821 YHL008CYHL008C 1884 nt8.9□□□□□ -0.98
SSN8P47821 DUT1YBR252W 444 nt8.9□□□□□ -0.98
SSN8P47821 INA1YLR413W 2028 nt8.88□□□□□ -0.99
SSN8P47821 NRT1YOR071C 1797 nt8.87□□□□□ -0.99
SSN8P47821 STR3YGL184C 1398 nt8.86□□□□□ -0.99
SSN8P47821 YFR018CYFR018C 1092 nt8.85□□□□□ -0.99
SSN8P47821 RDN18-1RDN18-1 1800 nt8.84□□□□□ -0.99
SSN8P47821 RDN18-2RDN18-2 1800 nt8.84□□□□□ -0.99
SSN8P47821 YFL066CYFL066C 1179 nt8.84□□□□□ -0.99
SSN8P47821 NIT1YIL164C 600 nt8.83□□□□□ -1
SSN8P47821 DAT1YML113W 747 nt8.83□□□□□ -1
SSN8P47821 VPS75YNL246W 795 nt8.83□□□□□ -1
SSN8P47821 AQY2YLL052C 450 nt8.82□□□□□ -1
SSN8P47821 HXK1YFR053C 1458 nt8.82□□□□□ -1
SSN8P47821 SGT2YOR007C 1041 nt8.8□□□□□ -1
SSN8P47821 YMR209CYMR209C 1374 nt8.8□□□□□ -1
SSN8P47821 HOL1YNR055C 1761 nt8.8□□□□□ -1
SSN8P47821 HEM14YER014W 1620 nt8.79□□□□□ -1
SSN8P47821 YDR094WYDR094W 336 nt8.78□□□□□ -1
SSN8P47821 ALD5YER073W 1563 nt8.78□□□□□ -1
SSN8P47821 YCR102CYCR102C 1107 nt8.77□□□□□ -1.01
SSN8P47821 MTO1YGL236C 2010 nt8.76□□□□□ -1.01
SSN8P47821 RTN2YDL204W 1182 nt8.75□□□□□ -1.01
SSN8P47821 PRE6YOL038W 765 nt8.75□□□□□ -1.01
SSN8P47821 RRT5YFR032C 870 nt8.72□□□□□ -1.01
SSN8P47821 NBP35YGL091C 987 nt8.71□□□□□ -1.02
SSN8P47821 PAU7YAR020C 168 nt8.7□□□□□ -1.02
SSN8P47821 FRA1YLL029W 2250 nt8.66□□□□□ -1.02
SSN8P47821 ILV3YJR016C 1758 nt8.66□□□□□ -1.02
SSN8P47821 PAU16YKL224C 372 nt8.64□□□□□ -1.03
SSN8P47821 ARP6YLR085C 1317 nt8.63□□□□□ -1.03
SSN8P47821 MIR1YJR077C 936 nt8.62□□□□□ -1.03
SSN8P47821 MEP3YPR138C 1470 nt8.62□□□□□ -1.03
SSN8P47821 TIR3YIL011W 810 nt8.61□□□□□ -1.03
SSN8P47821 SHB17YKR043C 816 nt8.61□□□□□ -1.03
SSN8P47821 PLB1YMR008C 1995 nt8.6□□□□□ -1.03
SSN8P47821 TPN1YGL186C 1740 nt8.6□□□□□ -1.03
SSN8P47821 PSD1YNL169C 1503 nt8.59□□□□□ -1.03
SSN8P47821 YDR010CYDR010C 333 nt8.59□□□□□ -1.03
SSN8P47821 LSC2YGR244C 1284 nt8.58□□□□□ -1.04
SSN8P47821 TOM71YHR117W 1920 nt8.56□□□□□ -1.04
SSN8P47821 HIF1YLL022C 1158 nt8.56□□□□□ -1.04
SSN8P47821 ALR1YOL130W 2580 nt8.55□□□□□ -1.04
SSN8P47821 SHH4YLR164W 507 nt8.55□□□□□ -1.04
SSN8P47821 UBA4YHR111W 1323 nt8.54□□□□□ -1.04
SSN8P47821 RET2YFR051C 1641 nt8.54□□□□□ -1.04
SSN8P47821 THI74YDR438W 1113 nt8.54□□□□□ -1.04
SSN8P47821 MDL2YPL270W 2322 nt8.53□□□□□ -1.04
SSN8P47821 PRO1YDR300C 1287 nt8.52□□□□□ -1.05
SSN8P47821 NAT4YMR069W 858 nt8.52□□□□□ -1.05
SSN8P47821 SFA1YDL168W 1161 nt8.51□□□□□ -1.05
SSN8P47821 YHL019W-AYHL019W-A 594 nt8.51□□□□□ -1.05
SSN8P47821 POM34YLR018C 900 nt8.51□□□□□ -1.05
SSN8P47821 GAP1YKR039W 1809 nt8.51□□□□□ -1.05
SSN8P47821 ALD4YOR374W 1560 nt8.51□□□□□ -1.05
SSN8P47821 PHO89YBR296C 1725 nt8.5□□□□□ -1.05
SSN8P47821 SFL1YOR140W 2301 nt8.49□□□□□ -1.05
SSN8P47821 YSR3YKR053C 1215 nt8.49□□□□□ -1.05
SSN8P47821 YML089CYML089C 369 nt8.49□□□□□ -1.05
SSN8P47821 ATG15YCR068W 1563 nt8.48□□□□□ -1.05
SSN8P47821 MSF1YPR047W 1410 nt8.47□□□□□ -1.05
SSN8P47821 PRM5YIL117C 957 nt8.47□□□□□ -1.05
SSN8P47821 UTR1YJR049C 1593 nt8.47□□□□□ -1.05
SSN8P47821 UGP1YKL035W 1500 nt8.46□□□□□ -1.05
SSN8P47821 CYT1YOR065W 930 nt8.46□□□□□ -1.06
SSN8P47821 YCR087WYCR087W 516 nt8.45□□□□□ -1.06
SSN8P47821 HIS2YFR025C 1008 nt8.45□□□□□ -1.06
SSN8P47821 TOM6YOR045W 186 nt8.45□□□□□ -1.06
SSN8P47821 YOR072WYOR072W 315 nt8.45□□□□□ -1.06
SSN8P47821 SAM35YHR083W 990 nt8.44□□□□□ -1.06
SSN8P47821 RBG1YAL036C 1110 nt8.44□□□□□ -1.06
SSN8P47821 RSC4YKR008W 1878 nt8.44□□□□□ -1.06
SSN8P47821 ZRT3YKL175W 1512 nt8.42□□□□□ -1.06
SSN8P47821 MRP20YDR405W 792 nt8.41□□□□□ -1.06
SSN8P47821 PCP1YGR101W 1041 nt8.41□□□□□ -1.06
SSN8P47821 NSG2YNL156C 900 nt8.41□□□□□ -1.06
SSN8P47821 COQ2YNR041C 1119 nt8.41□□□□□ -1.06
SSN8P47821 XYL2YLR070C 1071 nt8.4□□□□□ -1.06
SSN8P47821 YGL034CYGL034C 366 nt8.39□□□□□ -1.07
SSN8P47821 YFL015W-AYFL015W-A 318 nt8.38□□□□□ -1.07
SSN8P47821 PEX2YJL210W 816 nt8.38□□□□□ -1.07
SSN8P47821 YNL024CYNL024C 741 nt8.38□□□□□ -1.07
SSN8P47821 TIF6YPR016C 738 nt8.38□□□□□ -1.07
SSN8P47821 DIF1YLR437C 402 nt8.37□□□□□ -1.07
SSN8P47821 MEX67YPL169C 1800 nt8.37□□□□□ -1.07
SSN8P47821 LPD1YFL018C 1500 nt8.37□□□□□ -1.07
SSN8P47821 HIP1YGR191W 1812 nt8.36□□□□□ -1.07
SSN8P47821 YLR173WYLR173W 1827 nt8.36□□□□□ -1.07
SSN8P47821 AIM45YPR004C 1035 nt8.36□□□□□ -1.07
SSN8P47821 THI6YPL214C 1623 nt8.36□□□□□ -1.07
SSN8P47821 DUR3YHL016C 2208 nt8.34□□□□□ -1.07
SSN8P47821 DMA2YNL116W 1569 nt8.34□□□□□ -1.07
SSN8P47821 RPL4BYDR012W 1089 nt8.33□□□□□ -1.08
SSN8P47821 CLB6YGR109C 1143 nt8.33□□□□□ -1.08
SSN8P47821 MET28YIR017C 564 nt8.33□□□□□ -1.08
SSN8P47821 RPL4AYBR031W 1089 nt8.33□□□□□ -1.08
SSN8P47821 UTH1YKR042W 1098 nt8.32□□□□□ -1.08
SSN8P47821 COQ8YGL119W 1506 nt8.31□□□□□ -1.08
SSN8P47821 YJL067WYJL067W 351 nt8.31□□□□□ -1.08
Retrieved 100 of 7,029 protein–RNA pairs in 45.8 ms