Protein–RNA interactions for Protein: P39956

RPH1, DNA damage-responsive transcriptional repressor RPH1, yeastyeast

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPH1P39956 TIR3YIL011W 810 nt9.96□□□□□ -0.82
RPH1P39956 DPS1YLL018C 1674 nt9.96□□□□□ -0.82
RPH1P39956 RDN18-1RDN18-1 1800 nt9.96□□□□□ -0.82
RPH1P39956 RDN18-2RDN18-2 1800 nt9.96□□□□□ -0.82
RPH1P39956 CYT2YKL087C 675 nt9.92□□□□□ -0.82
RPH1P39956 SHH4YLR164W 507 nt9.92□□□□□ -0.82
RPH1P39956 CLB6YGR109C 1143 nt9.91□□□□□ -0.82
RPH1P39956 TOM6YOR045W 186 nt9.9□□□□□ -0.82
RPH1P39956 RPL4BYDR012W 1089 nt9.89□□□□□ -0.83
RPH1P39956 RPL4AYBR031W 1089 nt9.89□□□□□ -0.83
RPH1P39956 RDN37-1RDN37-1 5354 nt9.89□□□□□ -0.83
RPH1P39956 RDN37-2RDN37-2 5354 nt9.89□□□□□ -0.83
RPH1P39956 SNF1YDR477W 1902 nt9.88□□□□□ -0.83
RPH1P39956 LSC2YGR244C 1284 nt9.87□□□□□ -0.83
RPH1P39956 POM34YLR018C 900 nt9.87□□□□□ -0.83
RPH1P39956 PRO1YDR300C 1287 nt9.86□□□□□ -0.83
RPH1P39956 YML089CYML089C 369 nt9.86□□□□□ -0.83
RPH1P39956 PEX2YJL210W 816 nt9.85□□□□□ -0.83
RPH1P39956 UTH1YKR042W 1098 nt9.84□□□□□ -0.83
RPH1P39956 RPM1RPM1 483 nt9.84□□□□□ -0.83
RPH1P39956 SDH5YOL071W 489 nt9.83□□□□□ -0.84
RPH1P39956 HEL2YDR266C 1920 nt9.83□□□□□ -0.84
RPH1P39956 ATG15YCR068W 1563 nt9.83□□□□□ -0.84
RPH1P39956 RTN2YDL204W 1182 nt9.82□□□□□ -0.84
RPH1P39956 RBG2YGR173W 1107 nt9.82□□□□□ -0.84
RPH1P39956 YMR226CYMR226C 804 nt9.82□□□□□ -0.84
RPH1P39956 YLR111WYLR111W 333 nt9.81□□□□□ -0.84
RPH1P39956 ARP6YLR085C 1317 nt9.81□□□□□ -0.84
RPH1P39956 RPS14BYJL191W 417 nt9.8□□□□□ -0.84
RPH1P39956 RDN25-1RDN25-1 3396 nt9.8□□□□□ -0.84
RPH1P39956 RDN25-2RDN25-2 3396 nt9.8□□□□□ -0.84
RPH1P39956 NRT1YOR071C 1797 nt9.79□□□□□ -0.84
RPH1P39956 YGR259CYGR259C 441 nt9.79□□□□□ -0.84
RPH1P39956 HIP1YGR191W 1812 nt9.79□□□□□ -0.84
RPH1P39956 YKR005CYKR005C 1578 nt9.79□□□□□ -0.84
RPH1P39956 MET28YIR017C 564 nt9.76□□□□□ -0.85
RPH1P39956 GAP1YKR039W 1809 nt9.76□□□□□ -0.85
RPH1P39956 PLB1YMR008C 1995 nt9.75□□□□□ -0.85
RPH1P39956 YAT1YAR035W 2064 nt9.75□□□□□ -0.85
RPH1P39956 BMT6YLR063W 1098 nt9.74□□□□□ -0.85
RPH1P39956 TIF6YPR016C 738 nt9.74□□□□□ -0.85
RPH1P39956 TSC10YBR265W 963 nt9.72□□□□□ -0.85
RPH1P39956 RAD23YEL037C 1197 nt9.69□□□□□ -0.86
RPH1P39956 YGR012WYGR012W 1182 nt9.67□□□□□ -0.86
RPH1P39956 FIT3YOR383C 615 nt9.66□□□□□ -0.86
RPH1P39956 UTR1YJR049C 1593 nt9.62□□□□□ -0.87
RPH1P39956 YLR279WYLR279W 390 nt9.6□□□□□ -0.87
RPH1P39956 DIF1YLR437C 402 nt9.6□□□□□ -0.87
RPH1P39956 SAM35YHR083W 990 nt9.59□□□□□ -0.87
RPH1P39956 IRC24YIR036C 792 nt9.59□□□□□ -0.87
RPH1P39956 RIM8YGL045W 1629 nt9.57□□□□□ -0.88
RPH1P39956 RIB3YDR487C 627 nt9.57□□□□□ -0.88
RPH1P39956 YAR028WYAR028W 705 nt9.57□□□□□ -0.88
RPH1P39956 YPL222C-AYPL222C-A 246 nt9.57□□□□□ -0.88
RPH1P39956 SAM1YLR180W 1149 nt9.55□□□□□ -0.88
RPH1P39956 YLR437C-AYLR437C-A 228 nt9.55□□□□□ -0.88
RPH1P39956 ALP1YNL270C 1722 nt9.54□□□□□ -0.88
RPH1P39956 MSB4YOL112W 1479 nt9.53□□□□□ -0.88
RPH1P39956 AKR2YOR034C 2250 nt9.53□□□□□ -0.88
RPH1P39956 PRM5YIL117C 957 nt9.52□□□□□ -0.89
RPH1P39956 CAB5YDR196C 726 nt9.51□□□□□ -0.89
RPH1P39956 SPT20YOL148C 1815 nt9.51□□□□□ -0.89
RPH1P39956 MTG2YHR168W 1557 nt9.5□□□□□ -0.89
RPH1P39956 ZTA1YBR046C 1005 nt9.49□□□□□ -0.89
RPH1P39956 MET2YNL277W 1461 nt9.47□□□□□ -0.89
RPH1P39956 SFP1YLR403W 2052 nt9.46□□□□□ -0.89
RPH1P39956 ALD4YOR374W 1560 nt9.44□□□□□ -0.9
RPH1P39956 MAE1YKL029C 2010 nt9.43□□□□□ -0.9
RPH1P39956 SED1YDR077W 1017 nt9.43□□□□□ -0.9
RPH1P39956 YER190C-AYER190C-A 576 nt9.43□□□□□ -0.9
RPH1P39956 YGR296C-AYGR296C-A 576 nt9.43□□□□□ -0.9
RPH1P39956 YML133W-AYML133W-A 576 nt9.43□□□□□ -0.9
RPH1P39956 YNL339W-AYNL339W-A 576 nt9.43□□□□□ -0.9
RPH1P39956 YPL283W-AYPL283W-A 576 nt9.43□□□□□ -0.9
RPH1P39956 LOT5YKL183W 921 nt9.42□□□□□ -0.9
RPH1P39956 GND1YHR183W 1470 nt9.41□□□□□ -0.9
RPH1P39956 LIP1YMR298W 453 nt9.41□□□□□ -0.9
RPH1P39956 RPC82YPR190C 1965 nt9.4□□□□□ -0.9
RPH1P39956 YGL114WYGL114W 2178 nt9.4□□□□□ -0.91
RPH1P39956 YPI1YFR003C 468 nt9.38□□□□□ -0.91
RPH1P39956 SMM1YNR015W 1155 nt9.37□□□□□ -0.91
RPH1P39956 HXT1YHR094C 1713 nt9.36□□□□□ -0.91
RPH1P39956 HIF1YLL022C 1158 nt9.36□□□□□ -0.91
RPH1P39956 MUP1YGR055W 1725 nt9.36□□□□□ -0.91
RPH1P39956 APT2YDR441C 546 nt9.35□□□□□ -0.91
RPH1P39956 YJL195CYJL195C 702 nt9.34□□□□□ -0.91
RPH1P39956 ADH1YOL086C 1047 nt9.34□□□□□ -0.91
RPH1P39956 FCY21YER060W 1587 nt9.33□□□□□ -0.92
RPH1P39956 NPP1YCR026C 2229 nt9.32□□□□□ -0.92
RPH1P39956 DBP1YPL119C 1854 nt9.32□□□□□ -0.92
RPH1P39956 FUN14YAL008W 597 nt9.3□□□□□ -0.92
RPH1P39956 TOA2YKL058W 369 nt9.3□□□□□ -0.92
RPH1P39956 BRR1YPR057W 1026 nt9.3□□□□□ -0.92
RPH1P39956 INA1YLR413W 2028 nt9.3□□□□□ -0.92
RPH1P39956 LSB3YFR024C-A 1380 nt9.29□□□□□ -0.92
RPH1P39956 UGA4YDL210W 1716 nt9.29□□□□□ -0.92
RPH1P39956 YBL086CYBL086C 1401 nt9.29□□□□□ -0.92
RPH1P39956 MEP3YPR138C 1470 nt9.28□□□□□ -0.92
RPH1P39956 YNR029CYNR029C 1290 nt9.28□□□□□ -0.92
RPH1P39956 STE4YOR212W 1272 nt9.28□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 8.7 ms