Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 HSL7YBR133C 2484 nt11.14□□□□□ -0.63
TY1B-AO13527 AQY2YLL052C 450 nt11.13□□□□□ -0.63
TY1B-AO13527 RPS14BYJL191W 417 nt11.11□□□□□ -0.63
TY1B-AO13527 TOM6YOR045W 186 nt11.1□□□□□ -0.63
TY1B-AO13527 RAD23YEL037C 1197 nt11.09□□□□□ -0.63
TY1B-AO13527 SHH4YLR164W 507 nt11.09□□□□□ -0.63
TY1B-AO13527 STR3YGL184C 1398 nt11.07□□□□□ -0.64
TY1B-AO13527 YML089CYML089C 369 nt11.07□□□□□ -0.64
TY1B-AO13527 SSN3YPL042C 1668 nt11.06□□□□□ -0.64
TY1B-AO13527 PEX2YJL210W 816 nt11.06□□□□□ -0.64
TY1B-AO13527 POM34YLR018C 900 nt11.05□□□□□ -0.64
TY1B-AO13527 TSC10YBR265W 963 nt11.05□□□□□ -0.64
TY1B-AO13527 NRT1YOR071C 1797 nt11.05□□□□□ -0.64
TY1B-AO13527 YCL074WYCL074W 927 nt11.04□□□□□ -0.64
TY1B-AO13527 LSC2YGR244C 1284 nt11.04□□□□□ -0.64
TY1B-AO13527 RDN25-1RDN25-1 3396 nt11.04□□□□□ -0.64
TY1B-AO13527 RDN25-2RDN25-2 3396 nt11.04□□□□□ -0.64
TY1B-AO13527 HIP1YGR191W 1812 nt11.02□□□□□ -0.64
TY1B-AO13527 PRO1YDR300C 1287 nt11.01□□□□□ -0.65
TY1B-AO13527 YGR012WYGR012W 1182 nt10.99□□□□□ -0.65
TY1B-AO13527 MET28YIR017C 564 nt10.99□□□□□ -0.65
TY1B-AO13527 ATG15YCR068W 1563 nt10.99□□□□□ -0.65
TY1B-AO13527 RDN18-1RDN18-1 1800 nt10.95□□□□□ -0.66
TY1B-AO13527 RDN18-2RDN18-2 1800 nt10.95□□□□□ -0.66
TY1B-AO13527 RIB3YDR487C 627 nt10.95□□□□□ -0.66
TY1B-AO13527 YLR437C-AYLR437C-A 228 nt10.93□□□□□ -0.66
TY1B-AO13527 TIF6YPR016C 738 nt10.93□□□□□ -0.66
TY1B-AO13527 RDN37-1RDN37-1 5354 nt10.92□□□□□ -0.66
TY1B-AO13527 RDN37-2RDN37-2 5354 nt10.92□□□□□ -0.66
TY1B-AO13527 FIT3YOR383C 615 nt10.9□□□□□ -0.66
TY1B-AO13527 YPL222C-AYPL222C-A 246 nt10.88□□□□□ -0.67
TY1B-AO13527 ARP6YLR085C 1317 nt10.87□□□□□ -0.67
TY1B-AO13527 YLR279WYLR279W 390 nt10.87□□□□□ -0.67
TY1B-AO13527 GAP1YKR039W 1809 nt10.86□□□□□ -0.67
TY1B-AO13527 HEL2YDR266C 1920 nt10.86□□□□□ -0.67
TY1B-AO13527 SFP1YLR403W 2052 nt10.85□□□□□ -0.67
TY1B-AO13527 NPP1YCR026C 2229 nt10.84□□□□□ -0.67
TY1B-AO13527 RTN2YDL204W 1182 nt10.83□□□□□ -0.68
TY1B-AO13527 STE4YOR212W 1272 nt10.82□□□□□ -0.68
TY1B-AO13527 CAB5YDR196C 726 nt10.81□□□□□ -0.68
TY1B-AO13527 BSP1YPR171W 1731 nt10.81□□□□□ -0.68
TY1B-AO13527 FUR4YBR021W 1902 nt10.8□□□□□ -0.68
TY1B-AO13527 HSP60YLR259C 1719 nt10.8□□□□□ -0.68
TY1B-AO13527 NAR1YNL240C 1476 nt10.8□□□□□ -0.68
TY1B-AO13527 MSB4YOL112W 1479 nt10.79□□□□□ -0.68
TY1B-AO13527 FUN14YAL008W 597 nt10.78□□□□□ -0.68
TY1B-AO13527 YJL195CYJL195C 702 nt10.78□□□□□ -0.68
TY1B-AO13527 PLB1YMR008C 1995 nt10.77□□□□□ -0.69
TY1B-AO13527 YAT1YAR035W 2064 nt10.76□□□□□ -0.69
TY1B-AO13527 GID7YCL039W 2238 nt10.76□□□□□ -0.69
TY1B-AO13527 RAD51YER095W 1203 nt10.75□□□□□ -0.69
TY1B-AO13527 YPI1YFR003C 468 nt10.75□□□□□ -0.69
TY1B-AO13527 YNR029CYNR029C 1290 nt10.73□□□□□ -0.69
TY1B-AO13527 ADH1YOL086C 1047 nt10.72□□□□□ -0.69
TY1B-AO13527 ALP1YNL270C 1722 nt10.72□□□□□ -0.69
TY1B-AO13527 LOT5YKL183W 921 nt10.71□□□□□ -0.69
TY1B-AO13527 YAR028WYAR028W 705 nt10.71□□□□□ -0.69
TY1B-AO13527 GND1YHR183W 1470 nt10.7□□□□□ -0.7
TY1B-AO13527 ADH7YCR105W 1086 nt10.7□□□□□ -0.7
TY1B-AO13527 PAU15YIR041W 375 nt10.69□□□□□ -0.7
TY1B-AO13527 YLR349WYLR349W 507 nt10.69□□□□□ -0.7
TY1B-AO13527 YGR259CYGR259C 441 nt10.68□□□□□ -0.7
TY1B-AO13527 DIF1YLR437C 402 nt10.67□□□□□ -0.7
TY1B-AO13527 CMP2YML057W 1815 nt10.66□□□□□ -0.7
TY1B-AO13527 AKR2YOR034C 2250 nt10.66□□□□□ -0.7
TY1B-AO13527 MET2YNL277W 1461 nt10.66□□□□□ -0.7
TY1B-AO13527 YKR005CYKR005C 1578 nt10.65□□□□□ -0.7
TY1B-AO13527 SAM35YHR083W 990 nt10.64□□□□□ -0.71
TY1B-AO13527 AAC1YMR056C 930 nt10.64□□□□□ -0.71
TY1B-AO13527 UTR1YJR049C 1593 nt10.63□□□□□ -0.71
TY1B-AO13527 MTG2YHR168W 1557 nt10.62□□□□□ -0.71
TY1B-AO13527 APT2YDR441C 546 nt10.61□□□□□ -0.71
TY1B-AO13527 YEL008WYEL008W 381 nt10.61□□□□□ -0.71
TY1B-AO13527 GPN2YOR262W 1044 nt10.61□□□□□ -0.71
TY1B-AO13527 ZTA1YBR046C 1005 nt10.61□□□□□ -0.71
TY1B-AO13527 SMM1YNR015W 1155 nt10.6□□□□□ -0.71
TY1B-AO13527 BMT6YLR063W 1098 nt10.59□□□□□ -0.71
TY1B-AO13527 RFC1YOR217W 2586 nt10.59□□□□□ -0.71
TY1B-AO13527 ESBP6YNL125C 2022 nt10.58□□□□□ -0.72
TY1B-AO13527 PRP4YPR178W 1398 nt10.57□□□□□ -0.72
TY1B-AO13527 HMG2YLR450W 3138 nt10.56□□□□□ -0.72
TY1B-AO13527 CPD1YGR247W 720 nt10.56□□□□□ -0.72
TY1B-AO13527 LSB3YFR024C-A 1380 nt10.55□□□□□ -0.72
TY1B-AO13527 FCY21YER060W 1587 nt10.52□□□□□ -0.72
TY1B-AO13527 SED1YDR077W 1017 nt10.5□□□□□ -0.73
TY1B-AO13527 tS(GCU)LtS(GCU)L 80 nt10.5□□□□□ -0.73
TY1B-AO13527 RIB2YOL066C 1776 nt10.48□□□□□ -0.73
TY1B-AO13527 DPS1YLL018C 1674 nt10.47□□□□□ -0.73
TY1B-AO13527 YER190C-AYER190C-A 576 nt10.47□□□□□ -0.73
TY1B-AO13527 YGR296C-AYGR296C-A 576 nt10.47□□□□□ -0.73
TY1B-AO13527 YML133W-AYML133W-A 576 nt10.47□□□□□ -0.73
TY1B-AO13527 YNL339W-AYNL339W-A 576 nt10.47□□□□□ -0.73
TY1B-AO13527 YPL283W-AYPL283W-A 576 nt10.47□□□□□ -0.73
TY1B-AO13527 VRG4YGL225W 1014 nt10.46□□□□□ -0.73
TY1B-AO13527 PRM5YIL117C 957 nt10.46□□□□□ -0.73
TY1B-AO13527 LIP1YMR298W 453 nt10.46□□□□□ -0.73
TY1B-AO13527 TPO4YOR273C 1980 nt10.45□□□□□ -0.74
TY1B-AO13527 PBP1YGR178C 2169 nt10.45□□□□□ -0.74
TY1B-AO13527 PRY1YJL079C 900 nt10.44□□□□□ -0.74
TY1B-AO13527 ESS1YJR017C 513 nt10.44□□□□□ -0.74
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms