Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.26■■■□□ 2.43
SOX1O00570 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC30.26■■■□□ 2.43
SOX1O00570 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC30.25■■■□□ 2.43
SOX1O00570 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SOX1O00570 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC30.23■■■□□ 2.43
SOX1O00570 GDI1-215ENST00000630693 786 ntTSL 4 BASIC30.23■■■□□ 2.43
SOX1O00570 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.23■■■□□ 2.43
SOX1O00570 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SOX1O00570 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC30.22■■■□□ 2.43
SOX1O00570 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.22■■■□□ 2.43
SOX1O00570 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SOX1O00570 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.21■■■□□ 2.43
SOX1O00570 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
SOX1O00570 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC30.2■■■□□ 2.43
SOX1O00570 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
SOX1O00570 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC30.19■■■□□ 2.42
SOX1O00570 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SOX1O00570 DENR-202ENST00000455982 1052 ntTSL 5 BASIC30.16■■■□□ 2.42
SOX1O00570 AC021231.2-201ENST00000594613 730 ntBASIC30.15■■■□□ 2.42
SOX1O00570 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.14■■■□□ 2.42
SOX1O00570 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
SOX1O00570 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC30.13■■■□□ 2.41
SOX1O00570 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
SOX1O00570 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
SOX1O00570 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
SOX1O00570 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
SOX1O00570 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC30.09■■■□□ 2.41
SOX1O00570 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC30.08■■■□□ 2.41
SOX1O00570 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
SOX1O00570 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
SOX1O00570 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
SOX1O00570 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC30.06■■■□□ 2.4
SOX1O00570 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC30.05■■■□□ 2.4
SOX1O00570 CR559946.2-201ENST00000623684 991 ntBASIC30.04■■■□□ 2.4
SOX1O00570 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC30.04■■■□□ 2.4
SOX1O00570 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
SOX1O00570 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC30.01■■■□□ 2.39
SOX1O00570 BRF1-213ENST00000548421 1452 ntTSL 1 (best) BASIC30■■■□□ 2.39
SOX1O00570 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC30■■■□□ 2.39
SOX1O00570 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC30■■■□□ 2.39
SOX1O00570 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC29.99■■■□□ 2.39
SOX1O00570 RPS2-209ENST00000529806 993 ntTSL 3 BASIC29.98■■■□□ 2.39
SOX1O00570 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
SOX1O00570 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
SOX1O00570 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
SOX1O00570 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
SOX1O00570 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
SOX1O00570 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.95■■■□□ 2.39
SOX1O00570 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SOX1O00570 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
SOX1O00570 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC29.94■■■□□ 2.38
SOX1O00570 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC29.92■■■□□ 2.38
SOX1O00570 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC29.92■■■□□ 2.38
SOX1O00570 DUX4L11-201ENST00000611504 1267 ntBASIC29.91■■■□□ 2.38
SOX1O00570 DUX4L12-201ENST00000614593 1267 ntBASIC29.91■■■□□ 2.38
SOX1O00570 DUX4L14-201ENST00000621227 1267 ntBASIC29.91■■■□□ 2.38
SOX1O00570 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC29.9■■■□□ 2.38
SOX1O00570 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.9■■■□□ 2.38
SOX1O00570 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC29.9■■■□□ 2.38
SOX1O00570 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.89■■■□□ 2.38
SOX1O00570 AGPS-202ENST00000409888 815 ntTSL 4 BASIC29.88■■■□□ 2.37
SOX1O00570 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC29.88■■■□□ 2.37
SOX1O00570 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.86■■■□□ 2.37
SOX1O00570 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC29.85■■■□□ 2.37
SOX1O00570 CIB2-204ENST00000557846 934 ntTSL 3 BASIC29.85■■■□□ 2.37
SOX1O00570 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC29.84■■■□□ 2.37
SOX1O00570 RARRES2P2-201ENST00000394842 485 ntBASIC29.82■■■□□ 2.36
SOX1O00570 ABHD17AP5-201ENST00000580133 923 ntBASIC29.82■■■□□ 2.36
SOX1O00570 ILK-212ENST00000532063 1617 ntTSL 2 BASIC29.82■■■□□ 2.36
SOX1O00570 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC29.8■■■□□ 2.36
SOX1O00570 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
SOX1O00570 LINC01971-201ENST00000617888 1048 ntBASIC29.77■■■□□ 2.36
SOX1O00570 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
SOX1O00570 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC29.76■■■□□ 2.35
SOX1O00570 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC29.76■■■□□ 2.35
SOX1O00570 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.75■■■□□ 2.35
SOX1O00570 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
SOX1O00570 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.74■■■□□ 2.35
SOX1O00570 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
SOX1O00570 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC29.72■■■□□ 2.35
SOX1O00570 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
SOX1O00570 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC29.69■■■□□ 2.34
SOX1O00570 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
SOX1O00570 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC29.68■■■□□ 2.34
SOX1O00570 METRNL-202ENST00000570778 967 ntTSL 5 BASIC29.68■■■□□ 2.34
SOX1O00570 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC29.67■■■□□ 2.34
SOX1O00570 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
SOX1O00570 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.65■■■□□ 2.34
SOX1O00570 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
SOX1O00570 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC29.64■■■□□ 2.34
SOX1O00570 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC29.64■■■□□ 2.34
SOX1O00570 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
SOX1O00570 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC29.63■■■□□ 2.33
SOX1O00570 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
SOX1O00570 MIR6090-201ENST00000622481 60 ntBASIC29.63■■■□□ 2.33
SOX1O00570 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SOX1O00570 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
SOX1O00570 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.62■■■□□ 2.33
SOX1O00570 PPP1R1A-201ENST00000257905 1826 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
SOX1O00570 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms