Protein–RNA interactions for Protein: A6NI15

MSGN1, Mesogenin-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSGN1A6NI15 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSGN1A6NI15 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSGN1A6NI15 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSGN1A6NI15 GNB5-202ENST00000358784 1735 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
MSGN1A6NI15 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC22.41■■□□□ 1.18
MSGN1A6NI15 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
MSGN1A6NI15 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSGN1A6NI15 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
MSGN1A6NI15 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC22.4■■□□□ 1.18
MSGN1A6NI15 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
MSGN1A6NI15 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
MSGN1A6NI15 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
MSGN1A6NI15 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
MSGN1A6NI15 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
MSGN1A6NI15 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MSGN1A6NI15 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.36■■□□□ 1.17
MSGN1A6NI15 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSGN1A6NI15 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSGN1A6NI15 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC22.35■■□□□ 1.17
MSGN1A6NI15 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSGN1A6NI15 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
MSGN1A6NI15 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
MSGN1A6NI15 TRAPPC10-202ENST00000380221 1763 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
MSGN1A6NI15 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
MSGN1A6NI15 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
MSGN1A6NI15 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC22.32■■□□□ 1.16
MSGN1A6NI15 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
MSGN1A6NI15 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
MSGN1A6NI15 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
MSGN1A6NI15 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
MSGN1A6NI15 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
MSGN1A6NI15 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
MSGN1A6NI15 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC22.29■■□□□ 1.16
MSGN1A6NI15 FBXO2-201ENST00000354287 1560 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
MSGN1A6NI15 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
MSGN1A6NI15 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
MSGN1A6NI15 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MSGN1A6NI15 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC22.26■■□□□ 1.15
MSGN1A6NI15 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
MSGN1A6NI15 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC22.25■■□□□ 1.15
MSGN1A6NI15 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSGN1A6NI15 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSGN1A6NI15 DYNLL1-208ENST00000550178 581 ntBASIC22.25■■□□□ 1.15
MSGN1A6NI15 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
MSGN1A6NI15 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC22.24■■□□□ 1.15
MSGN1A6NI15 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC22.23■■□□□ 1.15
MSGN1A6NI15 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
MSGN1A6NI15 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC22.22■■□□□ 1.15
MSGN1A6NI15 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
MSGN1A6NI15 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSGN1A6NI15 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSGN1A6NI15 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC22.22■■□□□ 1.15
MSGN1A6NI15 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSGN1A6NI15 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSGN1A6NI15 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
MSGN1A6NI15 MAPK1-202ENST00000398822 1487 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
MSGN1A6NI15 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
MSGN1A6NI15 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MSGN1A6NI15 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MSGN1A6NI15 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
MSGN1A6NI15 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
MSGN1A6NI15 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MSGN1A6NI15 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC22.19■■□□□ 1.14
MSGN1A6NI15 MVK-208ENST00000539696 608 ntTSL 5 BASIC22.19■■□□□ 1.14
MSGN1A6NI15 RASSF7-201ENST00000397582 1731 ntAPPRIS ALT2 TSL 2 BASIC22.18■■□□□ 1.14
MSGN1A6NI15 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC22.18■■□□□ 1.14
MSGN1A6NI15 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC22.17■■□□□ 1.14
MSGN1A6NI15 AP002365.1-201ENST00000603448 772 ntBASIC22.17■■□□□ 1.14
MSGN1A6NI15 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MSGN1A6NI15 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC22.16■■□□□ 1.14
MSGN1A6NI15 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MSGN1A6NI15 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC22.16■■□□□ 1.14
MSGN1A6NI15 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSGN1A6NI15 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
MSGN1A6NI15 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
MSGN1A6NI15 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
MSGN1A6NI15 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
MSGN1A6NI15 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
MSGN1A6NI15 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSGN1A6NI15 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSGN1A6NI15 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSGN1A6NI15 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSGN1A6NI15 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MSGN1A6NI15 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSGN1A6NI15 AL031258.1-201ENST00000623562 325 ntBASIC22.09■■□□□ 1.13
MSGN1A6NI15 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
MSGN1A6NI15 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
MSGN1A6NI15 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
MSGN1A6NI15 KCTD17-209ENST00000610767 1502 ntAPPRIS ALT2 TSL 3 BASIC22.06■■□□□ 1.12
MSGN1A6NI15 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MSGN1A6NI15 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.05■■□□□ 1.12
MSGN1A6NI15 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.04■■□□□ 1.12
MSGN1A6NI15 ST7-AS1-201ENST00000456775 1889 ntBASIC22.04■■□□□ 1.12
MSGN1A6NI15 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC22.04■■□□□ 1.12
MSGN1A6NI15 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MSGN1A6NI15 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.03■■□□□ 1.12
MSGN1A6NI15 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
MSGN1A6NI15 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC22.03■■□□□ 1.12
MSGN1A6NI15 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
MSGN1A6NI15 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms