Protein–RNA interactions for Protein: A0A075B6P5

IGKV2-28, Immunoglobulin kappa variable 2-28, humanhuman

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV2-28A0A075B6P5 BMP7-202ENST00000395864 1746 ntTSL 5 BASIC17.91■□□□□ 0.46
IGKV2-28A0A075B6P5 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
IGKV2-28A0A075B6P5 LTB4R2-204ENST00000533293 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
IGKV2-28A0A075B6P5 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
IGKV2-28A0A075B6P5 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
IGKV2-28A0A075B6P5 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV2-28A0A075B6P5 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
IGKV2-28A0A075B6P5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
IGKV2-28A0A075B6P5 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.46
IGKV2-28A0A075B6P5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
IGKV2-28A0A075B6P5 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
IGKV2-28A0A075B6P5 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
IGKV2-28A0A075B6P5 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
IGKV2-28A0A075B6P5 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV2-28A0A075B6P5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV2-28A0A075B6P5 ARRDC1-201ENST00000371421 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV2-28A0A075B6P5 GNPTAB-206ENST00000549940 1678 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
IGKV2-28A0A075B6P5 JUND-201ENST00000252818 1863 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
IGKV2-28A0A075B6P5 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
IGKV2-28A0A075B6P5 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
IGKV2-28A0A075B6P5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC17.82■□□□□ 0.44
IGKV2-28A0A075B6P5 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV2-28A0A075B6P5 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
IGKV2-28A0A075B6P5 MPST-201ENST00000341116 1504 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
IGKV2-28A0A075B6P5 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV2-28A0A075B6P5 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV2-28A0A075B6P5 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
IGKV2-28A0A075B6P5 NFKBIA-209ENST00000557389 1537 ntTSL 2 BASIC17.81■□□□□ 0.44
IGKV2-28A0A075B6P5 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
IGKV2-28A0A075B6P5 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
IGKV2-28A0A075B6P5 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV2-28A0A075B6P5 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV2-28A0A075B6P5 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV2-28A0A075B6P5 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV2-28A0A075B6P5 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
IGKV2-28A0A075B6P5 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
IGKV2-28A0A075B6P5 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC17.77■□□□□ 0.44
IGKV2-28A0A075B6P5 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
IGKV2-28A0A075B6P5 CD151-202ENST00000397420 1648 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGKV2-28A0A075B6P5 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
IGKV2-28A0A075B6P5 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGKV2-28A0A075B6P5 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
IGKV2-28A0A075B6P5 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
IGKV2-28A0A075B6P5 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
IGKV2-28A0A075B6P5 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV2-28A0A075B6P5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
IGKV2-28A0A075B6P5 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
IGKV2-28A0A075B6P5 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
IGKV2-28A0A075B6P5 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV2-28A0A075B6P5 DEXI-201ENST00000331808 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV2-28A0A075B6P5 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
IGKV2-28A0A075B6P5 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV2-28A0A075B6P5 TMEM80-202ENST00000397512 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
IGKV2-28A0A075B6P5 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC17.71■□□□□ 0.43
IGKV2-28A0A075B6P5 LY6K-202ENST00000518841 855 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
IGKV2-28A0A075B6P5 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV2-28A0A075B6P5 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC17.7■□□□□ 0.42
IGKV2-28A0A075B6P5 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
IGKV2-28A0A075B6P5 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV2-28A0A075B6P5 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV2-28A0A075B6P5 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
IGKV2-28A0A075B6P5 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC17.66■□□□□ 0.42
IGKV2-28A0A075B6P5 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
IGKV2-28A0A075B6P5 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 ST7-AS1-201ENST00000456775 1889 ntBASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 CPNE1-203ENST00000397442 1695 ntTSL 5 BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC17.65■□□□□ 0.42
IGKV2-28A0A075B6P5 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
IGKV2-28A0A075B6P5 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC17.63■□□□□ 0.41
IGKV2-28A0A075B6P5 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
IGKV2-28A0A075B6P5 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC17.62■□□□□ 0.41
IGKV2-28A0A075B6P5 CMAS-201ENST00000229329 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
IGKV2-28A0A075B6P5 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.6■□□□□ 0.41
IGKV2-28A0A075B6P5 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC17.6■□□□□ 0.41
IGKV2-28A0A075B6P5 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
IGKV2-28A0A075B6P5 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
IGKV2-28A0A075B6P5 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC17.58■□□□□ 0.4
IGKV2-28A0A075B6P5 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
IGKV2-28A0A075B6P5 AC006077.2-201ENST00000623591 457 ntBASIC17.57■□□□□ 0.4
IGKV2-28A0A075B6P5 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
IGKV2-28A0A075B6P5 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV2-28A0A075B6P5 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
IGKV2-28A0A075B6P5 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
IGKV2-28A0A075B6P5 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
IGKV2-28A0A075B6P5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms