Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FANK1-203ENST00000368693 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 PHACTR1-203ENST00000379335 943 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 OR7E122P-201ENST00000383606 1017 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 MIR219A2-202ENST00000385220 97 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 TXNRD3NB-201ENST00000404489 738 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 HMGN1P4-201ENST00000419500 290 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 AF186996.6-201ENST00000485294 149 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 AC147876.1-201ENST00000504408 322 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.81□□□□□ -0.36
SLC1A1P43005 SMIM15-202ENST00000507416 584 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 AC015795.2-201ENST00000512720 575 ntTSL 3 BASIC12.81□□□□□ -0.36
SLC1A1P43005 AC092745.1-202ENST00000539795 602 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 CYB561A3-213ENST00000539890 572 ntTSL 4 BASIC12.81□□□□□ -0.36
SLC1A1P43005 BORCS5-203ENST00000542728 580 ntTSL 3 BASIC12.81□□□□□ -0.36
SLC1A1P43005 AC126614.1-201ENST00000547552 548 ntTSL 4 BASIC12.81□□□□□ -0.36
SLC1A1P43005 AC139099.2-201ENST00000572343 641 ntTSL 3 BASIC12.81□□□□□ -0.36
SLC1A1P43005 ALOX12P1-201ENST00000579299 1229 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 MCM8-AS1-201ENST00000613522 983 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 LINC00959-202ENST00000637128 826 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 MAEL-206ENST00000622874 1700 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 RGS9-203ENST00000449996 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 SLC2A1-203ENST00000426263 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 STX16-205ENST00000361830 4318 ntTSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 DGCR8-203ENST00000407755 4129 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 HSPA8-201ENST00000227378 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 PMS2CL-202ENST00000403974 1529 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 SLC3A1-207ENST00000409741 1537 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 CDKL1-203ENST00000395834 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 AP000350.2-201ENST00000439492 1763 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 XRRA1-201ENST00000321448 4695 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 FARP1-201ENST00000319562 10262 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 FLNB-203ENST00000419752 2002 ntTSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 NFATC4-209ENST00000553879 2707 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 SIRPA-201ENST00000356025 3867 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 CHCHD7-218ENST00000523975 1805 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 ACLY-204ENST00000537919 2974 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 AC015959.1-201ENST00000623263 1377 ntBASIC12.81□□□□□ -0.36
SLC1A1P43005 ZNF341-201ENST00000342427 3661 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC12.81□□□□□ -0.36
SLC1A1P43005 WARS2-IT1-201ENST00000423984 2060 ntTSL 2 BASIC12.81□□□□□ -0.36
SLC1A1P43005 KCNA4-201ENST00000328224 4172 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SLC1A1P43005 CHRNA1-208ENST00000636168 1862 ntTSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC010422.6-201ENST00000593682 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 SPATA2-201ENST00000289431 4022 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 SLC43A3-202ENST00000395123 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 FBXW11-201ENST00000265094 4342 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 PIGB-201ENST00000164305 2172 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 EXD2-206ENST00000409949 2688 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC073578.3-201ENST00000624926 4191 ntBASIC12.8□□□□□ -0.36
SLC1A1P43005 SCAMP1-AS1-201ENST00000421004 1479 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 CR382285.1-201ENST00000625012 1485 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 TXN2-201ENST00000216185 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 ATP6V1H-207ENST00000520188 1967 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 HS3ST1-201ENST00000002596 8031 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 ZNF641-203ENST00000544117 7819 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 TCF7L2-223ENST00000629706 1755 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 CD27-AS1-201ENST00000399492 1094 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 AL121761.1-203ENST00000426012 677 ntTSL 3 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AL669970.2-201ENST00000446184 280 ntTSL 3 BASIC12.8□□□□□ -0.36
SLC1A1P43005 RPS18P9-201ENST00000482817 460 ntBASIC12.8□□□□□ -0.36
SLC1A1P43005 AL365275.1-201ENST00000518570 471 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC004923.3-201ENST00000527532 355 ntBASIC12.8□□□□□ -0.36
SLC1A1P43005 LINC02450-201ENST00000550177 1003 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC124947.1-201ENST00000552835 814 ntTSL 3 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AL133297.2-201ENST00000563162 485 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 SNAPC5-205ENST00000563480 920 ntAPPRIS P2 TSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC12.8□□□□□ -0.36
SLC1A1P43005 AC106774.4-201ENST00000600799 409 ntBASIC12.8□□□□□ -0.36
SLC1A1P43005 CTSH-218ENST00000615999 972 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 FURIN-208ENST00000640725 224 ntTSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 RPS24-204ENST00000440692 2814 ntTSL 3 BASIC12.8□□□□□ -0.36
SLC1A1P43005 ACO1-202ENST00000379923 3601 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 MAST4-202ENST00000403625 10711 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 PRAMEF27-201ENST00000436041 1863 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 HERC6-203ENST00000380265 3781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 MON2-212ENST00000552115 3760 ntTSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 CFAP52-201ENST00000352665 2193 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 LINC01119-202ENST00000468141 2157 ntTSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 KLK7-202ENST00000391807 1912 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 LINC01254-202ENST00000567609 1907 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 THAP9-AS1-202ENST00000504520 2770 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SLC1A1P43005 DCTN2-201ENST00000434715 1677 ntTSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 ADGRE2-204ENST00000392965 2513 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
SLC1A1P43005 CSF2RA-208ENST00000417535 1955 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SLC1A1P43005 SLC27A6-203ENST00000506176 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SLC1A1P43005 ELMOD3-205ENST00000409344 2564 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SLC1A1P43005 GPR17-206ENST00000544369 2598 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SLC1A1P43005 USP6NL-206ENST00000609853 1748 ntTSL 4 BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms