Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AL591424.3-201ENST00000614278 872 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 AL137028.2-201ENST00000614601 256 ntBASIC12.85□□□□□ -0.35
SLC1A1P43005 AC138393.1-201ENST00000622033 624 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 PGAP2-235ENST00000532523 1696 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 KRT38-201ENST00000246646 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 PCSK9-201ENST00000302118 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 GGPS1-203ENST00000391855 1407 ntTSL 2 BASIC12.85□□□□□ -0.35
SLC1A1P43005 ACSM2B-202ENST00000414188 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 CNTROB-201ENST00000380262 3769 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 LRRC8A-202ENST00000372599 4161 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 RNF207-201ENST00000377939 3924 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 AC010210.1-201ENST00000502521 1978 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 TP53TG5-201ENST00000372726 2374 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 SULT1A3-202ENST00000395138 1326 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 PTPRS-201ENST00000262963 4766 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 PTPRS-210ENST00000592099 4766 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 PAX6-255ENST00000639386 1723 ntTSL 5 BASIC12.85□□□□□ -0.35
SLC1A1P43005 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SLC1A1P43005 TMEM170A-201ENST00000357613 4959 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 PLEKHA2-209ENST00000617275 5582 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 TTYH3-203ENST00000403167 4263 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 AC008132.1-201ENST00000419447 2068 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 SPAG5-201ENST00000321765 4040 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 LY9-205ENST00000392203 2213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 AL512488.1-201ENST00000433544 1671 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 MCMDC2-202ENST00000396592 2373 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 AL359317.2-201ENST00000554898 1826 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 BSDC1-206ENST00000455895 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 NCALD-202ENST00000311028 3655 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 OPN1SW-201ENST00000249389 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 AC027801.1-201ENST00000376609 2100 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 FAM9C-202ENST00000380625 1122 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 GEMIN7-202ENST00000391951 716 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 FAM238A-201ENST00000412114 1091 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 AL121994.1-201ENST00000413189 402 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC1A1P43005 PHBP11-201ENST00000420550 809 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 ACTG1P23-201ENST00000437653 1074 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 B9D1-206ENST00000461069 923 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 RNA5SP288-201ENST00000516075 93 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 AL162231.1-205ENST00000544078 338 ntAPPRIS P2 TSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 AC133548.2-202ENST00000562267 148 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 NAT9-224ENST00000583757 583 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC1A1P43005 AC093503.1-201ENST00000593888 495 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC1A1P43005 SDHD-201ENST00000375549 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 LINC00877-207ENST00000488545 1561 ntTSL 3 BASIC12.84□□□□□ -0.35
SLC1A1P43005 MIER2-201ENST00000264819 6884 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 MED24-212ENST00000501516 3037 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 NSD2-206ENST00000382895 7827 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 ZBTB20-212ENST00000474710 2757 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 NPR2-201ENST00000342694 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 BCAS3-222ENST00000589222 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 AL034399.2-201ENST00000430140 2090 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 RPS3-217ENST00000531188 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 CICP5-201ENST00000424045 2215 ntBASIC12.84□□□□□ -0.35
SLC1A1P43005 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SLC1A1P43005 NLRP2-206ENST00000427260 3411 ntTSL 2 BASIC12.84□□□□□ -0.35
SLC1A1P43005 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SLC1A1P43005 LOX-201ENST00000231004 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SLC1A1P43005 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC12.83□□□□□ -0.35
SLC1A1P43005 ALDH3A2-203ENST00000395575 3640 ntAPPRIS P3 TSL 5 BASIC12.83□□□□□ -0.35
SLC1A1P43005 FBXO25-201ENST00000276326 2104 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SLC1A1P43005 AL138899.1-201ENST00000415019 1999 ntTSL 2 BASIC12.83□□□□□ -0.35
SLC1A1P43005 ZNF133-215ENST00000630056 1999 ntTSL 2 BASIC12.83□□□□□ -0.35
SLC1A1P43005 ELOVL7-201ENST00000425382 3827 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 CLIP3-201ENST00000360535 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 NAV2-204ENST00000396087 7882 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 RFX5-202ENST00000368870 2459 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 OR10H1-202ENST00000641419 4376 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
SLC1A1P43005 LINC01122-207ENST00000452840 4077 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC008555.2-201ENST00000600348 1714 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 NUP93-220ENST00000569842 2834 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 SEH1L-201ENST00000262124 3494 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 DLGAP4-203ENST00000373907 3337 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 GRIPAP1-201ENST00000376423 3031 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 FAM96A-201ENST00000300030 1105 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 COX20P1-201ENST00000366529 357 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 MPDU1-203ENST00000396501 1125 ntTSL 2 BASIC12.83□□□□□ -0.36
SLC1A1P43005 LINC00339-201ENST00000404210 1189 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 LINC00339-202ENST00000416769 1077 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC010997.2-201ENST00000427610 260 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC253536.4-201ENST00000440539 267 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 AC002066.1-201ENST00000446355 514 ntTSL 5 BASIC12.83□□□□□ -0.36
SLC1A1P43005 AC128689.1-202ENST00000459861 827 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC1A1P43005 RCC2P4-201ENST00000513160 1042 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 CTBP2P6-201ENST00000526402 1229 ntBASIC12.83□□□□□ -0.36
SLC1A1P43005 HAX1-211ENST00000532105 771 ntTSL 3 BASIC12.83□□□□□ -0.36
SLC1A1P43005 NKAPP1-204ENST00000555168 557 ntTSL 4 BASIC12.83□□□□□ -0.36
SLC1A1P43005 LINC02081-201ENST00000586185 877 ntTSL 3 BASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms