Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 PAK3-206ENST00000425146 2477 ntAPPRIS P3 TSL 2 BASIC11.25□□□□□ -0.61
P04436 GPR179-203ENST00000616987 7980 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 SLC6A1-201ENST00000287766 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 RNF165-201ENST00000269439 7596 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
P04436 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 ARHGAP12-205ENST00000396144 5084 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 MSR1-205ENST00000445506 1513 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 TUBAL3-202ENST00000479328 1505 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 LINC01115-202ENST00000621134 1519 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
P04436 COX7A2L-202ENST00000378669 3056 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P04436 LINC01471-201ENST00000461398 3079 ntTSL 5 BASIC11.24□□□□□ -0.61
P04436 CEP57-210ENST00000538658 2084 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 ARHGAP24-203ENST00000395184 4661 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P04436 GLP1R-201ENST00000373256 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04436 TUBE1-202ENST00000368662 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 SH3KBP1-202ENST00000379698 2678 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 EIF2D-202ENST00000367114 1633 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
P04436 HSD3B2-201ENST00000369416 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 BGN-201ENST00000331595 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 DCAF11-203ENST00000396941 2402 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 CHST6-201ENST00000332272 7957 ntAPPRIS P1 TSL 3 BASIC11.24□□□□□ -0.61
P04436 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 TOR1AIP1-212ENST00000606911 8704 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 TROVE2-203ENST00000367444 1857 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 PTGFR-202ENST00000370757 4379 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 HIST1H1E-201ENST00000304218 754 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
P04436 TCTE1-201ENST00000371504 616 ntTSL 3 BASIC11.24□□□□□ -0.61
P04436 LINC01849-201ENST00000414647 517 ntTSL 4 BASIC11.24□□□□□ -0.61
P04436 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 AC013269.2-201ENST00000422631 727 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 AC004870.4-202ENST00000433337 455 ntTSL 3 BASIC11.24□□□□□ -0.61
P04436 AL356273.1-201ENST00000441261 1152 ntBASIC11.24□□□□□ -0.61
P04436 HNRNPA1P73-201ENST00000446472 928 ntBASIC11.24□□□□□ -0.61
P04436 MTND6P9-201ENST00000458075 519 ntBASIC11.24□□□□□ -0.61
P04436 RN7SL186P-201ENST00000466485 297 ntBASIC11.24□□□□□ -0.61
P04436 RN7SL386P-201ENST00000485776 297 ntBASIC11.24□□□□□ -0.61
P04436 HNRNPA1P62-201ENST00000559372 952 ntBASIC11.24□□□□□ -0.61
P04436 AC006236.1-201ENST00000576249 797 ntBASIC11.24□□□□□ -0.61
P04436 SKAP1-AS1-201ENST00000582246 687 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 LINC00662-204ENST00000588027 562 ntTSL 5 BASIC11.24□□□□□ -0.61
P04436 RDM1-216ENST00000613308 779 ntAPPRIS ALT2 TSL 3 BASIC11.24□□□□□ -0.61
P04436 FAM69A-204ENST00000615519 865 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 AC092471.1-202ENST00000637160 999 ntBASIC11.24□□□□□ -0.61
P04436 AC005041.1-201ENST00000517883 7033 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04436 JADE1-201ENST00000226319 5772 ntAPPRIS P3 TSL 5 BASIC11.24□□□□□ -0.61
P04436 FAM214B-204ENST00000378566 2566 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 PRR19-202ENST00000499536 1956 ntAPPRIS P2 TSL 2 BASIC11.24□□□□□ -0.61
P04436 IGF2BP1-202ENST00000431824 1317 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 ENC1-206ENST00000537006 2024 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04436 NID2-201ENST00000216286 4811 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 MBP-208ENST00000397866 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 SPIN1-201ENST00000375859 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 PAX9-201ENST00000361487 4514 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 FAM198B-202ENST00000393807 4544 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 FITM2-201ENST00000396825 4597 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 ANKRD42-203ENST00000393392 2302 ntTSL 2 BASIC11.24□□□□□ -0.61
P04436 BAIAP3-204ENST00000426824 3930 ntAPPRIS ALT2 TSL 2 BASIC11.24□□□□□ -0.61
P04436 CCDC138-201ENST00000295124 2383 ntAPPRIS P3 TSL 2 BASIC11.24□□□□□ -0.61
P04436 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
P04436 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 ROPN1-201ENST00000184183 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
P04436 RIPOR1-205ENST00000540839 4260 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P04436 SNX14-201ENST00000314673 3486 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC11.23□□□□□ -0.61
P04436 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.23□□□□□ -0.61
P04436 NBN-203ENST00000409330 4523 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P04436 SC5D-208ENST00000534230 1861 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 MISP-201ENST00000215582 2871 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 HSPBAP1-201ENST00000306103 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 BDNF-218ENST00000533246 4000 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 CYTH2-213ENST00000620214 2020 ntTSL 5 BASIC11.23□□□□□ -0.61
P04436 HIPK1-AS1-204ENST00000450706 2117 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 SEMA6D-207ENST00000536845 3754 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
P04436 MRPS28-201ENST00000276585 850 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 SPACA7-201ENST00000283550 795 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 AC245297.1-201ENST00000313342 933 ntBASIC11.23□□□□□ -0.61
P04436 AC005102.1-201ENST00000403118 479 ntBASIC11.23□□□□□ -0.61
P04436 CFAP36-205ENST00000407816 1125 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
P04436 AP001341.1-201ENST00000409758 763 ntTSL 3 BASIC11.23□□□□□ -0.61
P04436 CYCS-203ENST00000409764 799 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
P04436 PDZD9-201ENST00000424898 1260 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
P04436 AL512422.2-201ENST00000426453 551 ntTSL 2 BASIC11.23□□□□□ -0.61
P04436 AL135929.2-201ENST00000445687 505 ntBASIC11.23□□□□□ -0.61
P04436 HOPX-209ENST00000508121 904 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
P04436 GUSBP3-202ENST00000513408 1296 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
P04436 KRT128P-201ENST00000550729 663 ntBASIC11.23□□□□□ -0.61
P04436 SNAPC5-207ENST00000566658 574 ntAPPRIS ALT2 TSL 4 BASIC11.23□□□□□ -0.61
P04436 MIR4725-201ENST00000581700 90 ntBASIC11.23□□□□□ -0.61
P04436 AC079779.3-201ENST00000588842 1200 ntTSL 5 BASIC11.23□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms