Protein–RNA interactions for Protein: Q86UN3

RTN4RL2, Reticulon-4 receptor-like 2, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4RL2Q86UN3 KLF11-206ENST00000540845 3885 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.72
RTN4RL2Q86UN3 GBA-201ENST00000327247 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 TMEM106A-204ENST00000588659 1437 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 COL11A1-210ENST00000512756 5442 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 LOXL2-201ENST00000389131 3549 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 CD164-204ENST00000413644 2414 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 SMIM10L1-201ENST00000622602 4795 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 MS4A13-202ENST00000378186 928 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AF274858.1-201ENST00000406288 372 ntBASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AC019205.2-201ENST00000442007 1083 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AC010997.1-201ENST00000447646 350 ntBASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AC092944.1-204ENST00000475102 384 ntTSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 PSMD6-209ENST00000482510 1176 ntTSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 CMC2-202ENST00000486645 766 ntTSL 3 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AP002495.1-205ENST00000529513 655 ntAPPRIS ALT2 TSL 3 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 ZNF576-205ENST00000529930 830 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 LINC02328-202ENST00000554647 522 ntTSL 4 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 ITGB2-AS1-204ENST00000609592 482 ntTSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 SERPING1-213ENST00000619430 634 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 SOCS6-201ENST00000397942 5848 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 SERPINA5-203ENST00000553780 2071 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 POLN-201ENST00000382865 2899 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 STAT2-201ENST00000314128 3259 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 MED29-201ENST00000315588 3653 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 SLIT2-201ENST00000273739 5132 ntTSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 POGLUT1-201ENST00000295588 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 PAPSS1-201ENST00000265174 2731 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 PIPSL-202ENST00000489875 2733 ntBASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AC012485.1-201ENST00000456601 2509 ntTSL 2 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 USP3-202ENST00000380324 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 TMCO1-202ENST00000392129 1946 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 VRK3-202ENST00000377011 1749 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 AC109326.1-201ENST00000624705 1321 ntBASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 CSPG4P13-202ENST00000567704 4801 ntBASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 ATP7B-203ENST00000400366 6304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 FAM214B-201ENST00000322813 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 DPYD-201ENST00000306031 1779 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 CR2-203ENST00000367059 3877 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 TNPO2-210ENST00000588216 3056 ntAPPRIS ALT1 TSL 1 (best) BASIC10.52□□□□□ -0.73
RTN4RL2Q86UN3 ZFP64-202ENST00000346617 2876 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 IL21R-201ENST00000337929 4849 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 RBMY1F-202ENST00000454978 1810 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 WDR41-201ENST00000296679 3958 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 FAM234A-201ENST00000301678 2901 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 CD44-209ENST00000433892 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 ALDH18A1-202ENST00000371224 3359 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 ACSBG2-202ENST00000586696 2739 ntAPPRIS P3 TSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 TTLL2-201ENST00000239587 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SLC44A3-204ENST00000467909 2061 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 TMEM186-201ENST00000333050 1448 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 ANKRD18CP-201ENST00000354752 2980 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 GOLGA8Q-201ENST00000562783 1899 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 DNAL1-201ENST00000311089 2312 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 HTR3D-202ENST00000382489 1674 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 CHRNA1-205ENST00000409542 1460 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AC010201.2-201ENST00000605595 1495 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SDE2-201ENST00000272091 3975 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 TKTL1-202ENST00000369915 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL021877.1-201ENST00000457251 2194 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 C12orf74-202ENST00000544406 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SLURP1-201ENST00000246515 537 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 CFDP1-201ENST00000283882 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 XPC-201ENST00000285021 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 MRPS11-202ENST00000353598 766 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 TMEM79-202ENST00000357501 975 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 RN7SKP90-201ENST00000363013 335 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SNORD88B-201ENST00000408454 91 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL355334.1-201ENST00000417713 215 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 NME6-208ENST00000435684 599 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SUMF2-210ENST00000437307 947 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 C10orf71-AS1-201ENST00000437677 753 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 CHN2-214ENST00000439711 755 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL928921.1-201ENST00000441033 708 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AC114501.1-201ENST00000445949 172 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 RNASEH2CP1-201ENST00000454281 502 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 TAGLN3-203ENST00000455401 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 GDNF-207ENST00000515058 764 ntTSL 5 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL158801.2-201ENST00000554650 554 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 KRT18P7-201ENST00000557241 1219 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 SRRM2-AS1-204ENST00000573802 818 ntTSL 2 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 HNRNPA1P16-201ENST00000575692 955 ntBASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 AC005746.1-202ENST00000585495 716 ntTSL 5 BASIC10.51□□□□□ -0.73
RTN4RL2Q86UN3 RAB11B-205ENST00000601897 577 ntTSL 3 BASIC10.51□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms