Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
TNFRSF11AQ9Y6Q6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
TNFRSF11AQ9Y6Q6 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC26.7■■□□□ 1.87
TNFRSF11AQ9Y6Q6 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC139530.1-201ENST00000575312 1977 ntBASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CCDC92B-201ENST00000575506 885 ntBASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 ANKRD20A6P-201ENST00000618763 204 ntBASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC26.7■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
TNFRSF11AQ9Y6Q6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC087239.1-201ENST00000622671 572 ntBASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.68■■□□□ 1.86
TNFRSF11AQ9Y6Q6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 TERF1P2-201ENST00000583350 1212 ntBASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC26.67■■□□□ 1.86
TNFRSF11AQ9Y6Q6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC123595.1-201ENST00000440769 1046 ntBASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AL162430.1-201ENST00000480705 870 ntBASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 BX005040.4-201ENST00000637145 1518 ntBASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
TNFRSF11AQ9Y6Q6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
TNFRSF11AQ9Y6Q6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
TNFRSF11AQ9Y6Q6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
TNFRSF11AQ9Y6Q6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC26.64■■□□□ 1.85
TNFRSF11AQ9Y6Q6 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
TNFRSF11AQ9Y6Q6 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC26.63■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms