Protein–RNA interactions for Protein: Q9Y5G4

PCDHGA9, Protocadherin gamma-A9, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9Q9Y5G4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PCDHGA9Q9Y5G4 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 KRT19P1-201ENST00000405746 1186 ntBASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 AC026185.1-201ENST00000445748 174 ntBASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PCDHGA9Q9Y5G4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PCDHGA9Q9Y5G4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PCDHGA9Q9Y5G4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 AC087239.1-201ENST00000622671 572 ntBASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 AC004854.2-201ENST00000608450 1441 ntBASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PCDHGA9Q9Y5G4 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
PCDHGA9Q9Y5G4 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
PCDHGA9Q9Y5G4 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 KRT18P11-201ENST00000435214 1283 ntBASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.22■□□□□ 0.83
PCDHGA9Q9Y5G4 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
PCDHGA9Q9Y5G4 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 59.8 ms