Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.9■■□□□ 1.1
PCDHGC4Q9Y5F7 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC4Q9Y5F7 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC4Q9Y5F7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC21.89■■□□□ 1.1
PCDHGC4Q9Y5F7 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC4Q9Y5F7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PCDHGC4Q9Y5F7 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 SMUG1P1-201ENST00000590640 811 ntBASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.09
PCDHGC4Q9Y5F7 GUSBP5-202ENST00000510805 1989 ntBASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PCDHGC4Q9Y5F7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 AC012414.1-201ENST00000556676 535 ntBASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 MIR6084-201ENST00000622012 110 ntBASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PCDHGC4Q9Y5F7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PCDHGC4Q9Y5F7 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 AL358852.1-201ENST00000623174 1268 ntBASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 OR7E47P-201ENST00000546390 1422 ntBASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
PCDHGC4Q9Y5F7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 AL354811.1-201ENST00000610286 706 ntBASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PCDHGC4Q9Y5F7 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
PCDHGC4Q9Y5F7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms