Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 VGF-203ENST00000611537 1622 ntTSL 5 BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
MRPS28Q9Y2Q9 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 AC244015.2-201ENST00000616358 1861 ntBASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
MRPS28Q9Y2Q9 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 AC010997.5-201ENST00000609182 354 ntBASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
MRPS28Q9Y2Q9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
MRPS28Q9Y2Q9 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 GOLGA2P6-201ENST00000340929 2049 ntBASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 AL499627.2-201ENST00000606283 725 ntBASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.59■□□□□ 0.57
MRPS28Q9Y2Q9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPS28Q9Y2Q9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
MRPS28Q9Y2Q9 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 TSPY9P-201ENST00000440215 945 ntBASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 TSPY11P-201ENST00000442607 1045 ntBASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
MRPS28Q9Y2Q9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 AC239859.2-201ENST00000444165 318 ntBASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC18.57■□□□□ 0.56
MRPS28Q9Y2Q9 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms