Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 C1orf229-201ENST00000623686 2258 ntBASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 USP45-205ENST00000472914 1617 ntTSL 5 BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC21.69■■□□□ 1.06
CNOT6Q9ULM6 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
CNOT6Q9ULM6 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 MIR572-201ENST00000384983 95 ntBASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
CNOT6Q9ULM6 LINC00526-201ENST00000581067 1875 ntBASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 MIR935-201ENST00000401179 91 ntBASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CNOT6Q9ULM6 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 LINC01960-201ENST00000563759 1884 ntBASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 AC010141.3-201ENST00000456659 717 ntBASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.65■■□□□ 1.06
CNOT6Q9ULM6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CNOT6Q9ULM6 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 GUSBP5-202ENST00000510805 1989 ntBASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.63■■□□□ 1.05
CNOT6Q9ULM6 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
CNOT6Q9ULM6 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms