Protein–RNA interactions for Protein: Q9UHD9

UBQLN2, Ubiquilin-2, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN2Q9UHD9 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 AC133552.2-201ENST00000619106 1032 ntBASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.22■□□□□ 0.51
UBQLN2Q9UHD9 LINC01006-201ENST00000333319 2292 ntBASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 NTF6A-201ENST00000591175 560 ntBASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
UBQLN2Q9UHD9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 AC009831.1-201ENST00000580420 1582 ntBASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.2■□□□□ 0.5
UBQLN2Q9UHD9 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 AL161729.1-201ENST00000604104 1402 ntBASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.19■□□□□ 0.5
UBQLN2Q9UHD9 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 AC026202.3-201ENST00000600805 1127 ntBASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
UBQLN2Q9UHD9 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
UBQLN2Q9UHD9 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms