Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 AF131216.4-201ENST00000638924 1588 ntBASIC20.92■□□□□ 0.94
NDE1Q9NXR1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
NDE1Q9NXR1 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
NDE1Q9NXR1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 FP325331.1-202ENST00000623531 1380 ntBASIC20.9■□□□□ 0.94
NDE1Q9NXR1 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
NDE1Q9NXR1 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
NDE1Q9NXR1 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
NDE1Q9NXR1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
NDE1Q9NXR1 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.89■□□□□ 0.94
NDE1Q9NXR1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
NDE1Q9NXR1 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 AC009086.3-201ENST00000623486 1008 ntBASIC20.89■□□□□ 0.93
NDE1Q9NXR1 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
NDE1Q9NXR1 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 RNF126P1-201ENST00000567452 1320 ntBASIC20.88■□□□□ 0.93
NDE1Q9NXR1 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
NDE1Q9NXR1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
NDE1Q9NXR1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 MTX2-204ENST00000443241 799 ntTSL 3 BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 AC120024.1-201ENST00000562672 995 ntBASIC20.86■□□□□ 0.93
NDE1Q9NXR1 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 AC007952.6-201ENST00000573168 2673 ntBASIC20.86■□□□□ 0.93
NDE1Q9NXR1 AC003957.1-201ENST00000625108 2673 ntBASIC20.86■□□□□ 0.93
NDE1Q9NXR1 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
NDE1Q9NXR1 Z98882.1-201ENST00000622160 2253 ntBASIC20.85■□□□□ 0.93
NDE1Q9NXR1 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC20.85■□□□□ 0.93
NDE1Q9NXR1 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms