Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CUEDC1Q9NWM3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CUEDC1Q9NWM3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CUEDC1Q9NWM3 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 AC139530.1-201ENST00000575312 1977 ntBASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CUEDC1Q9NWM3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 OXCT2P1-201ENST00000447263 1535 ntBASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CUEDC1Q9NWM3 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 AC079089.2-201ENST00000531211 1277 ntBASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 AC087623.3-201ENST00000607047 1098 ntBASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CUEDC1Q9NWM3 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 LINC00526-201ENST00000581067 1875 ntBASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 AL117328.2-201ENST00000624617 1940 ntBASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.9■□□□□ 0.94
CUEDC1Q9NWM3 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.89■□□□□ 0.94
CUEDC1Q9NWM3 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC20.89■□□□□ 0.93
CUEDC1Q9NWM3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms