Protein–RNA interactions for Protein: Q9NWF9

RNF216, E3 ubiquitin-protein ligase RNF216, humanhuman

Predicted RBP Predictions only

Length 866 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF216Q9NWF9 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 ZNF331-218ENST00000513265 739 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 AL590133.2-202ENST00000561111 642 ntTSL 3 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 SP2-202ENST00000613139 908 ntTSL 5 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 NME4-211ENST00000620944 1193 ntTSL 2 BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC24.41■■□□□ 1.5
RNF216Q9NWF9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.4■■□□□ 1.5
RNF216Q9NWF9 EP400NL-214ENST00000641289 2402 ntBASIC24.4■■□□□ 1.5
RNF216Q9NWF9 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 AL117328.2-201ENST00000624617 1940 ntBASIC24.39■■□□□ 1.5
RNF216Q9NWF9 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 TSPY26P-201ENST00000476365 1326 ntBASIC24.39■■□□□ 1.5
RNF216Q9NWF9 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC24.39■■□□□ 1.5
RNF216Q9NWF9 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF216Q9NWF9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC24.39■■□□□ 1.49
RNF216Q9NWF9 AL117351.1-201ENST00000438864 766 ntBASIC24.39■■□□□ 1.49
RNF216Q9NWF9 YBX1P1-201ENST00000445822 960 ntBASIC24.39■■□□□ 1.49
RNF216Q9NWF9 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC24.39■■□□□ 1.49
RNF216Q9NWF9 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC24.39■■□□□ 1.49
RNF216Q9NWF9 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 AC007919.2-201ENST00000444110 511 ntBASIC24.38■■□□□ 1.49
RNF216Q9NWF9 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 IGHV3-19-201ENST00000521488 291 ntBASIC24.38■■□□□ 1.49
RNF216Q9NWF9 CCDC7-208ENST00000537047 657 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC24.38■■□□□ 1.49
RNF216Q9NWF9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 SLC47A1P1-202ENST00000449666 945 ntBASIC24.37■■□□□ 1.49
RNF216Q9NWF9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 RPL12P24-201ENST00000474907 486 ntBASIC24.37■■□□□ 1.49
RNF216Q9NWF9 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF216Q9NWF9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 AL499627.2-201ENST00000606283 725 ntBASIC24.36■■□□□ 1.49
RNF216Q9NWF9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF216Q9NWF9 AC133637.1-201ENST00000624115 1537 ntBASIC24.35■■□□□ 1.49
RNF216Q9NWF9 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 AC040160.2-201ENST00000623816 1675 ntBASIC24.35■■□□□ 1.49
RNF216Q9NWF9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 AC123595.1-201ENST00000440769 1046 ntBASIC24.35■■□□□ 1.49
RNF216Q9NWF9 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 AL354811.1-201ENST00000610286 706 ntBASIC24.35■■□□□ 1.49
RNF216Q9NWF9 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC24.35■■□□□ 1.49
RNF216Q9NWF9 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 MIR572-201ENST00000384983 95 ntBASIC24.34■■□□□ 1.49
RNF216Q9NWF9 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF216Q9NWF9 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms