Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC069152.1-201ENST00000438030 544 ntBASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 AC133552.2-202ENST00000575694 574 ntBASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 PFKL-212ENST00000628044 129 ntTSL 3 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC31.47■■■□□ 2.63
SLC52A1Q9NWF4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC31.46■■■□□ 2.63
SLC52A1Q9NWF4 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC31.45■■■□□ 2.63
SLC52A1Q9NWF4 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
SLC52A1Q9NWF4 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC31.45■■■□□ 2.63
SLC52A1Q9NWF4 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC31.45■■■□□ 2.62
SLC52A1Q9NWF4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC31.45■■■□□ 2.62
SLC52A1Q9NWF4 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC31.45■■■□□ 2.62
SLC52A1Q9NWF4 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 SERP1-208ENST00000491660 830 ntTSL 2 BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC31.44■■■□□ 2.62
SLC52A1Q9NWF4 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 AC020928.2-201ENST00000588717 2197 ntBASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 KRT18P20-201ENST00000548986 1279 ntBASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 AC133041.1-202ENST00000642053 222 ntBASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
SLC52A1Q9NWF4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 AF201337.1-201ENST00000520239 748 ntBASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC31.42■■■□□ 2.62
SLC52A1Q9NWF4 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 MIR4651-201ENST00000582622 73 ntBASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC31.41■■■□□ 2.62
SLC52A1Q9NWF4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 APTR-203ENST00000430801 583 ntTSL 5 BASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 AC010141.2-201ENST00000452426 721 ntBASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 AC138907.5-202ENST00000569484 235 ntBASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC31.4■■■□□ 2.62
SLC52A1Q9NWF4 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC31.39■■■□□ 2.62
SLC52A1Q9NWF4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 AC010536.3-201ENST00000620306 533 ntBASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC31.38■■■□□ 2.61
SLC52A1Q9NWF4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 DUSP8P5-201ENST00000422884 1815 ntBASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC31.37■■■□□ 2.61
SLC52A1Q9NWF4 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
SLC52A1Q9NWF4 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.35■■■□□ 2.61
SLC52A1Q9NWF4 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms