Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 FZD10-202ENST00000539839 3282 ntBASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CDC42SE1Q9NRR8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 AL032819.2-201ENST00000624543 2162 ntBASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SMG8-203ENST00000578922 2178 ntBASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 AC098818.2-201ENST00000564925 2320 ntBASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC11.24□□□□□ -0.61
CDC42SE1Q9NRR8 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 AL356309.3-201ENST00000624132 1934 ntBASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
CDC42SE1Q9NRR8 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 NFIC-211ENST00000641145 8399 ntBASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 AC011270.2-201ENST00000624293 2550 ntBASIC11.22□□□□□ -0.61
CDC42SE1Q9NRR8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
CDC42SE1Q9NRR8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 17 ms