Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 LHPP-203ENST00000392757 840 ntTSL 3 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.48■□□□□ 0.87
PRDM9Q9NQV7 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 LINC00526-201ENST00000581067 1875 ntBASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 AC079834.2-201ENST00000609776 1949 ntBASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PRDM9Q9NQV7 AC080038.3-201ENST00000623346 1952 ntBASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 AC092053.2-201ENST00000640557 1818 ntBASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.46■□□□□ 0.87
PRDM9Q9NQV7 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.45■□□□□ 0.86
PRDM9Q9NQV7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 AL358852.1-201ENST00000623174 1268 ntBASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.44■□□□□ 0.86
PRDM9Q9NQV7 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 NME4-202ENST00000382940 766 ntTSL 3 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 AL354811.1-201ENST00000610286 706 ntBASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 AC105233.4-201ENST00000642045 216 ntBASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC20.43■□□□□ 0.86
PRDM9Q9NQV7 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms