Protein–RNA interactions for Protein: Q9NQT4

EXOSC5, Exosome complex component RRP46, humanhuman

Known RBP eCLIP

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC5Q9NQT4 MFSD8-236ENST00000641509 4050 ntBASIC3.2□□□□□ -1.97e-7■■■■□ 26.2
EXOSC5Q9NQT4 MFSD8-233ENST00000641482 4860 ntBASIC3.07□□□□□ -1.927e-7■■■■□ 26.2
EXOSC5Q9NQT4 MFSD8-248ENST00000641774 4247 nt2.97□□□□□ -1.937e-7■■■■□ 26.2
EXOSC5Q9NQT4 MFSD8-210ENST00000641025 4261 nt2.69□□□□□ -1.987e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.072e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.132e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-213ENST00000495733 3404 ntTSL 213.21□□□□□ -0.292e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-212ENST00000482914 4834 ntTSL 1 (best)12.75□□□□□ -0.372e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-206ENST00000456339 887 ntTSL 411.95□□□□□ -0.52e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-219ENST00000607833 2338 ntAPPRIS ALT2 TSL 1 (best)11.78□□□□□ -0.522e-7■■■■□ 26.2
EXOSC5Q9NQT4 BRD2-203ENST00000395287 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC8.53□□□□□ -1.042e-7■■■■□ 26.2
EXOSC5Q9NQT4 ZNF235-205ENST00000591609 946 ntTSL 414.99□□□□□ -0.012e-6■■■■□ 26.1
EXOSC5Q9NQT4 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC9.99□□□□□ -0.812e-6■■■■□ 26.1
EXOSC5Q9NQT4 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.32e-6■■■■□ 26.1
EXOSC5Q9NQT4 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC5.44□□□□□ -1.542e-6■■■■□ 26.1
EXOSC5Q9NQT4 ZNF235-206ENST00000592844 616 ntTSL 24.14□□□□□ -1.752e-6■■■■□ 26.1
EXOSC5Q9NQT4 WDPCP-210ENST00000431065 782 ntTSL 413.42□□□□□ -0.261e-6■■■■□ 26.1
EXOSC5Q9NQT4 WDPCP-212ENST00000467687 596 ntTSL 53.47□□□□□ -1.851e-6■■■■□ 26.1
EXOSC5Q9NQT4 WDPCP-216ENST00000490935 847 ntTSL 53.26□□□□□ -1.891e-6■■■■□ 26.1
EXOSC5Q9NQT4 SMYD3-205ENST00000453676 562 ntTSL 44.06□□□□□ -1.768e-7■■■■□ 26.1
EXOSC5Q9NQT4 SLC39A10-205ENST00000430412 4478 ntTSL 24.83□□□□□ -1.646e-7■■■■□ 26.1
EXOSC5Q9NQT4 SLC39A10-206ENST00000444421 544 ntTSL 44.56□□□□□ -1.686e-7■■■■□ 26.1
EXOSC5Q9NQT4 SLC39A10-209ENST00000465851 2009 ntTSL 53.7□□□□□ -1.826e-7■■■■□ 26.1
EXOSC5Q9NQT4 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.876e-7■■■■□ 26.1
EXOSC5Q9NQT4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.96e-7■■■■□ 26.1
EXOSC5Q9NQT4 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC8.21□□□□□ -1.12e-7■■■■□ 26.1
EXOSC5Q9NQT4 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC11.1□□□□□ -0.638e-7■■■■□ 26
EXOSC5Q9NQT4 MARCH8-202ENST00000395769 1848 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.88e-7■■■■□ 26
EXOSC5Q9NQT4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.21□□□□□ -1.742e-6■■■■□ 26
EXOSC5Q9NQT4 IMMP2L-209ENST00000489381 856 ntTSL 53.39□□□□□ -1.872e-6■■■■□ 26
EXOSC5Q9NQT4 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC9.63□□□□□ -0.873e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-202ENST00000379305 2478 ntTSL 1 (best) BASIC7.88□□□□□ -1.153e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-206ENST00000448002 2582 ntTSL 1 (best)7.85□□□□□ -1.153e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.213e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-201ENST00000313221 2744 ntTSL 2 BASIC6.69□□□□□ -1.343e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-211ENST00000477915 743 ntTSL 55.97□□□□□ -1.453e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.94□□□□□ -1.623e-7■■■■□ 25.9
EXOSC5Q9NQT4 FBXL13-204ENST00000436908 2577 ntTSL 5 BASIC3.57□□□□□ -1.843e-7■■■■□ 25.9
EXOSC5Q9NQT4 LMBR1-209ENST00000434453 2229 ntTSL 521.83■■□□□ 1.088e-7■■■■□ 25.9
EXOSC5Q9NQT4 LMBR1-207ENST00000433968 578 ntTSL 416.55■□□□□ 0.248e-7■■■■□ 25.9
EXOSC5Q9NQT4 LMBR1-217ENST00000485985 644 ntTSL 216.55■□□□□ 0.248e-7■■■■□ 25.9
EXOSC5Q9NQT4 LMBR1-203ENST00000414218 451 ntTSL 515.93■□□□□ 0.148e-7■■■■□ 25.9
EXOSC5Q9NQT4 LMBR1-219ENST00000498034 478 ntTSL 315.72■□□□□ 0.118e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-217ENST00000486677 322 ntTSL 517.32■□□□□ 0.366e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-214ENST00000457755 530 ntTSL 317.32■□□□□ 0.366e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.236e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.32■□□□□ 0.26e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-216ENST00000509158 555 ntTSL 216.24■□□□□ 0.196e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.156e-7■■■■□ 25.9
EXOSC5Q9NQT4 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC15.98■□□□□ 0.156e-7■■■■□ 25.9
EXOSC5Q9NQT4 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC15.88■□□□□ 0.136e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.026e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC14.97□□□□□ -0.016e-7■■■■□ 25.9
EXOSC5Q9NQT4 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.096e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-211ENST00000446305 539 ntTSL 414.36□□□□□ -0.116e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-210ENST00000513033 567 ntTSL 414.34□□□□□ -0.116e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-203ENST00000435527 746 ntTSL 314.34□□□□□ -0.116e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-211ENST00000505958 758 ntTSL 513.22□□□□□ -0.296e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.336e-7■■■■□ 25.9
EXOSC5Q9NQT4 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.346e-7■■■■□ 25.9
EXOSC5Q9NQT4 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.346e-7■■■■□ 25.9
EXOSC5Q9NQT4 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.366e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-208ENST00000563961 4533 ntTSL 512.78□□□□□ -0.366e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.396e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-223ENST00000512671 795 ntTSL 212.36□□□□□ -0.436e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-208ENST00000509151 476 ntTSL 412.22□□□□□ -0.456e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.466e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.04□□□□□ -0.486e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-210ENST00000430867 551 ntTSL 511.19□□□□□ -0.626e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-213ENST00000506956 566 ntTSL 410.57□□□□□ -0.726e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-204ENST00000396675 2133 ntAPPRIS P3 TSL 1 (best) BASIC10.1□□□□□ -0.796e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-213ENST00000455539 1956 ntTSL 1 (best)9.97□□□□□ -0.816e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-215ENST00000566273 577 ntTSL 48.99□□□□□ -0.976e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP49-204ENST00000423567 752 ntTSL 28.68□□□□□ -1.026e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-203ENST00000542333 1966 ntTSL 27.77□□□□□ -1.176e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.296e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-224ENST00000513182 537 ntTSL 46.49□□□□□ -1.376e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-212ENST00000566004 559 ntTSL 46.21□□□□□ -1.426e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-222ENST00000512351 609 ntTSL 45.94□□□□□ -1.466e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-203ENST00000339809 1415 ntTSL 1 (best)5.9□□□□□ -1.476e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-207ENST00000563085 3194 ntTSL 25.17□□□□□ -1.586e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-228ENST00000514730 569 ntTSL 54.89□□□□□ -1.636e-7■■■■□ 25.9
EXOSC5Q9NQT4 USP7-219ENST00000569230 569 ntTSL 54.68□□□□□ -1.666e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-218ENST00000510778 716 ntTSL 54.46□□□□□ -1.76e-7■■■■□ 25.9
EXOSC5Q9NQT4 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC3.93□□□□□ -1.786e-7■■■■□ 25.9
EXOSC5Q9NQT4 TXNDC16-203ENST00000555312 566 ntTSL 53.8□□□□□ -1.86e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-215ENST00000507574 607 ntTSL 53.7□□□□□ -1.826e-7■■■■□ 25.9
EXOSC5Q9NQT4 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.67□□□□□ -1.826e-7■■■■□ 25.9
EXOSC5Q9NQT4 ICA1-212ENST00000447326 604 ntTSL 33.66□□□□□ -1.826e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-219ENST00000511401 577 ntTSL 53.62□□□□□ -1.836e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-229ENST00000514807 340 ntTSL 32.62□□□□□ -1.996e-7■■■■□ 25.9
EXOSC5Q9NQT4 CLOCK-206ENST00000506923 616 ntTSL 32.55□□□□□ -26e-7■■■■□ 25.9
EXOSC5Q9NQT4 RBPJ-230ENST00000515023 388 ntTSL 52.54□□□□□ -26e-7■■■■□ 25.9
EXOSC5Q9NQT4 PHIP-202ENST00000479165 5694 ntTSL 1 (best)1.3□□□□□ -2.26e-7■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-201ENST00000196169 3019 ntTSL 1 (best) BASIC10.55□□□□□ -0.721e-6■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-208ENST00000535286 2579 ntAPPRIS P1 TSL 1 (best) BASIC8.95□□□□□ -0.981e-6■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-202ENST00000377881 2532 ntTSL 1 (best) BASIC8.6□□□□□ -1.031e-6■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-209ENST00000621840 2497 ntTSL 1 (best) BASIC6.99□□□□□ -1.291e-6■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-207ENST00000484389 1863 ntTSL 25.17□□□□□ -1.581e-6■■■■□ 25.9
EXOSC5Q9NQT4 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.56□□□□□ -1.681e-6■■■■□ 25.9
Retrieved 100 of 8,799 protein–RNA pairs in 314.5 ms