Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 Z98882.1-201ENST00000622160 2253 ntBASIC22.57■■□□□ 1.2
DDX47Q9H0S4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC22.57■■□□□ 1.2
DDX47Q9H0S4 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.56■■□□□ 1.2
DDX47Q9H0S4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
DDX47Q9H0S4 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 BX664725.1-201ENST00000438252 379 ntBASIC22.54■■□□□ 1.2
DDX47Q9H0S4 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
DDX47Q9H0S4 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
DDX47Q9H0S4 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 TUB-203ENST00000534099 1759 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 AC073130.3-201ENST00000624389 2278 ntBASIC22.52■■□□□ 1.2
DDX47Q9H0S4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC22.52■■□□□ 1.2
DDX47Q9H0S4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 C17orf82-201ENST00000623772 1530 ntBASIC22.51■■□□□ 1.19
DDX47Q9H0S4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
DDX47Q9H0S4 FEM1AP4-201ENST00000443167 1987 ntBASIC22.5■■□□□ 1.19
DDX47Q9H0S4 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 AC092028.1-203ENST00000608262 953 ntBASIC22.5■■□□□ 1.19
DDX47Q9H0S4 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC22.5■■□□□ 1.19
DDX47Q9H0S4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
DDX47Q9H0S4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC22.49■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms