Protein–RNA interactions for Protein: Q9BT78

COPS4, COP9 signalosome complex subunit 4, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS4Q9BT78 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
COPS4Q9BT78 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC19.81■□□□□ 0.76
COPS4Q9BT78 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC19.81■□□□□ 0.76
COPS4Q9BT78 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
COPS4Q9BT78 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
COPS4Q9BT78 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 AC144652.1-201ENST00000609974 1624 ntBASIC19.8■□□□□ 0.76
COPS4Q9BT78 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COPS4Q9BT78 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
COPS4Q9BT78 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
COPS4Q9BT78 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
COPS4Q9BT78 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
COPS4Q9BT78 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.79■□□□□ 0.76
COPS4Q9BT78 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
COPS4Q9BT78 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.79■□□□□ 0.76
COPS4Q9BT78 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS4Q9BT78 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
COPS4Q9BT78 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS4Q9BT78 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
COPS4Q9BT78 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC19.78■□□□□ 0.76
COPS4Q9BT78 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC19.77■□□□□ 0.76
COPS4Q9BT78 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
COPS4Q9BT78 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPS4Q9BT78 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.77■□□□□ 0.76
COPS4Q9BT78 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
COPS4Q9BT78 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.77■□□□□ 0.76
COPS4Q9BT78 AC137630.3-201ENST00000607245 391 ntBASIC19.77■□□□□ 0.76
COPS4Q9BT78 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
COPS4Q9BT78 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPS4Q9BT78 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
COPS4Q9BT78 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
COPS4Q9BT78 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 AC092667.1-201ENST00000434301 2586 ntBASIC19.76■□□□□ 0.75
COPS4Q9BT78 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 SNX5-217ENST00000606557 1087 ntBASIC19.76■□□□□ 0.75
COPS4Q9BT78 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC19.76■□□□□ 0.75
COPS4Q9BT78 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
COPS4Q9BT78 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 LINC01960-201ENST00000563759 1884 ntBASIC19.75■□□□□ 0.75
COPS4Q9BT78 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
COPS4Q9BT78 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC19.75■□□□□ 0.75
COPS4Q9BT78 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC19.75■□□□□ 0.75
COPS4Q9BT78 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.75■□□□□ 0.75
COPS4Q9BT78 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
COPS4Q9BT78 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.75■□□□□ 0.75
COPS4Q9BT78 REST-206ENST00000612429 1376 ntTSL 5 BASIC19.74■□□□□ 0.75
COPS4Q9BT78 REST-207ENST00000616975 1370 ntTSL 5 BASIC19.74■□□□□ 0.75
COPS4Q9BT78 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
COPS4Q9BT78 AL157384.1-201ENST00000445995 2473 ntBASIC19.74■□□□□ 0.75
COPS4Q9BT78 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.74■□□□□ 0.75
COPS4Q9BT78 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
COPS4Q9BT78 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.74■□□□□ 0.75
COPS4Q9BT78 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms