Protein–RNA interactions for Protein: Q99884

SLC6A7, Sodium-dependent proline transporter, humanhuman

Predictions only

Length 636 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A7Q99884 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A7Q99884 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.82■□□□□ 0.6
SLC6A7Q99884 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SLC6A7Q99884 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC18.82■□□□□ 0.6
SLC6A7Q99884 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
SLC6A7Q99884 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 AC131274.2-201ENST00000580697 1507 ntBASIC18.81■□□□□ 0.6
SLC6A7Q99884 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.81■□□□□ 0.6
SLC6A7Q99884 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC18.81■□□□□ 0.6
SLC6A7Q99884 AC080038.3-201ENST00000623346 1952 ntBASIC18.81■□□□□ 0.6
SLC6A7Q99884 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SLC6A7Q99884 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A7Q99884 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A7Q99884 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A7Q99884 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.8■□□□□ 0.6
SLC6A7Q99884 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.8■□□□□ 0.6
SLC6A7Q99884 AC106739.1-201ENST00000617035 715 ntBASIC18.8■□□□□ 0.6
SLC6A7Q99884 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A7Q99884 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
SLC6A7Q99884 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A7Q99884 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
SLC6A7Q99884 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SLC6A7Q99884 MED25-211ENST00000617849 1548 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 MED17-221ENST00000639724 2317 ntTSL 5 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 AC142381.2-201ENST00000566120 298 ntBASIC18.79■□□□□ 0.6
SLC6A7Q99884 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SLC6A7Q99884 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SLC6A7Q99884 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A7Q99884 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A7Q99884 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A7Q99884 UNC93B3-201ENST00000308076 687 ntBASIC18.78■□□□□ 0.6
SLC6A7Q99884 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC6A7Q99884 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A7Q99884 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.78■□□□□ 0.6
SLC6A7Q99884 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A7Q99884 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A7Q99884 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.78■□□□□ 0.6
SLC6A7Q99884 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
SLC6A7Q99884 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 SLC25A24-204ENST00000569674 2357 ntBASIC18.77■□□□□ 0.6
SLC6A7Q99884 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
SLC6A7Q99884 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 SRD5A1P1-201ENST00000442297 786 ntBASIC18.77■□□□□ 0.6
SLC6A7Q99884 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 AL136162.1-201ENST00000607711 1078 ntBASIC18.77■□□□□ 0.6
SLC6A7Q99884 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC18.77■□□□□ 0.6
SLC6A7Q99884 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.59
SLC6A7Q99884 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
SLC6A7Q99884 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 ZNRF2P3-201ENST00000424200 374 ntBASIC18.76■□□□□ 0.59
SLC6A7Q99884 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SLC6A7Q99884 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.76■□□□□ 0.59
SLC6A7Q99884 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A7Q99884 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC18.75■□□□□ 0.59
SLC6A7Q99884 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.75■□□□□ 0.59
SLC6A7Q99884 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SLC6A7Q99884 AC026310.3-201ENST00000625186 2373 ntBASIC18.75■□□□□ 0.59
SLC6A7Q99884 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms