Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SPENQ96T58 AC005181.1-201ENST00000604782 1256 ntBASIC19.77■□□□□ 0.75
SPENQ96T58 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.76■□□□□ 0.75
SPENQ96T58 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
SPENQ96T58 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.76■□□□□ 0.75
SPENQ96T58 AC104187.1-201ENST00000607510 612 ntBASIC19.76■□□□□ 0.75
SPENQ96T58 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SPENQ96T58 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.75■□□□□ 0.75
SPENQ96T58 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPENQ96T58 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPENQ96T58 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.75■□□□□ 0.75
SPENQ96T58 AC231657.2-201ENST00000624556 255 ntBASIC19.75■□□□□ 0.75
SPENQ96T58 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.75■□□□□ 0.75
SPENQ96T58 AL596275.1-201ENST00000423464 877 ntBASIC19.75■□□□□ 0.75
SPENQ96T58 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.75■□□□□ 0.75
SPENQ96T58 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
SPENQ96T58 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC19.75■□□□□ 0.75
SPENQ96T58 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
SPENQ96T58 DUSP8P3-201ENST00000399571 1760 ntBASIC19.74■□□□□ 0.75
SPENQ96T58 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.74■□□□□ 0.75
SPENQ96T58 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 MFF-207ENST00000409565 1548 ntTSL 2 BASIC19.74■□□□□ 0.75
SPENQ96T58 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC19.74■□□□□ 0.75
SPENQ96T58 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.74■□□□□ 0.75
SPENQ96T58 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
SPENQ96T58 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
SPENQ96T58 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
SPENQ96T58 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.73■□□□□ 0.75
SPENQ96T58 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC19.73■□□□□ 0.75
SPENQ96T58 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.73■□□□□ 0.75
SPENQ96T58 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.73■□□□□ 0.75
SPENQ96T58 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.73■□□□□ 0.75
SPENQ96T58 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
SPENQ96T58 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.72■□□□□ 0.75
SPENQ96T58 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
SPENQ96T58 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
SPENQ96T58 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.72■□□□□ 0.75
SPENQ96T58 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 AC083906.2-201ENST00000511578 360 ntBASIC19.72■□□□□ 0.75
SPENQ96T58 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.72■□□□□ 0.75
SPENQ96T58 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
SPENQ96T58 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.72■□□□□ 0.75
SPENQ96T58 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SPENQ96T58 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
SPENQ96T58 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
SPENQ96T58 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SPENQ96T58 AL121832.2-201ENST00000610979 668 ntBASIC19.72■□□□□ 0.75
SPENQ96T58 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPENQ96T58 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
SPENQ96T58 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPENQ96T58 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.71■□□□□ 0.75
SPENQ96T58 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SPENQ96T58 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.71■□□□□ 0.75
SPENQ96T58 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPENQ96T58 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC19.71■□□□□ 0.75
SPENQ96T58 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SPENQ96T58 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.71■□□□□ 0.75
SPENQ96T58 SMUG1P1-201ENST00000590640 811 ntBASIC19.71■□□□□ 0.75
SPENQ96T58 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC19.7■□□□□ 0.74
SPENQ96T58 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.7■□□□□ 0.74
SPENQ96T58 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPENQ96T58 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC19.7■□□□□ 0.74
SPENQ96T58 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC19.7■□□□□ 0.74
SPENQ96T58 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPENQ96T58 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SPENQ96T58 ITM2C-210ENST00000620962 501 ntBASIC19.7■□□□□ 0.74
SPENQ96T58 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.69■□□□□ 0.74
SPENQ96T58 SLC7A5P1-201ENST00000568957 537 ntBASIC19.69■□□□□ 0.74
SPENQ96T58 ARL16-209ENST00000573715 763 ntTSL 3 BASIC19.69■□□□□ 0.74
SPENQ96T58 ARL16-211ENST00000576135 694 ntTSL 3 BASIC19.69■□□□□ 0.74
SPENQ96T58 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.69■□□□□ 0.74
SPENQ96T58 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SPENQ96T58 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC19.69■□□□□ 0.74
SPENQ96T58 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPENQ96T58 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SPENQ96T58 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SPENQ96T58 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms