Protein–RNA interactions for Protein: Q96RT7

TUBGCP6, Gamma-tubulin complex component 6, humanhuman

Predictions only

Length 1,819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP6Q96RT7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TUBGCP6Q96RT7 AC079140.4-201ENST00000507448 529 ntBASIC28.12■■■□□ 2.09
TUBGCP6Q96RT7 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC28.12■■■□□ 2.09
TUBGCP6Q96RT7 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TUBGCP6Q96RT7 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
TUBGCP6Q96RT7 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 KRT87P-202ENST00000534226 1464 ntBASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC28.11■■■□□ 2.09
TUBGCP6Q96RT7 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 POU5F1P3-201ENST00000428824 1078 ntBASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 MYCNOS-205ENST00000641950 531 ntBASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
TUBGCP6Q96RT7 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC28.09■■■□□ 2.09
TUBGCP6Q96RT7 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC28.09■■■□□ 2.09
TUBGCP6Q96RT7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC28.09■■■□□ 2.09
TUBGCP6Q96RT7 EI24-213ENST00000618552 1747 ntTSL 5 BASIC28.09■■■□□ 2.09
TUBGCP6Q96RT7 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
TUBGCP6Q96RT7 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 FAM201B-201ENST00000458407 597 ntBASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 SLC7A5P1-201ENST00000568957 537 ntBASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
TUBGCP6Q96RT7 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TUBGCP6Q96RT7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TUBGCP6Q96RT7 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
TUBGCP6Q96RT7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.07■■■□□ 2.08
TUBGCP6Q96RT7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC28.07■■■□□ 2.08
TUBGCP6Q96RT7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 PARP1-202ENST00000366792 553 ntTSL 3 BASIC28.06■■■□□ 2.08
TUBGCP6Q96RT7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 AC007322.1-201ENST00000426983 750 ntBASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 AC073210.2-201ENST00000430369 194 ntBASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 AF201337.1-201ENST00000520239 748 ntBASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC28.05■■■□□ 2.08
TUBGCP6Q96RT7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
TUBGCP6Q96RT7 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
TUBGCP6Q96RT7 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
TUBGCP6Q96RT7 PRORSD1P-201ENST00000295112 541 ntBASIC28.02■■■□□ 2.08
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms