Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX1Q92499 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC23.2■■□□□ 1.3
DDX1Q92499 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
DDX1Q92499 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.2■■□□□ 1.3
DDX1Q92499 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
DDX1Q92499 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
DDX1Q92499 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.19■■□□□ 1.3
DDX1Q92499 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC23.19■■□□□ 1.3
DDX1Q92499 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.19■■□□□ 1.3
DDX1Q92499 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
DDX1Q92499 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
DDX1Q92499 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
DDX1Q92499 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
DDX1Q92499 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
DDX1Q92499 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
DDX1Q92499 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC23.18■■□□□ 1.3
DDX1Q92499 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 RBM38-205ENST00000440234 686 ntTSL 2 BASIC23.18■■□□□ 1.3
DDX1Q92499 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC23.18■■□□□ 1.3
DDX1Q92499 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
DDX1Q92499 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
DDX1Q92499 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX1Q92499 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX1Q92499 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX1Q92499 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
DDX1Q92499 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
DDX1Q92499 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
DDX1Q92499 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
DDX1Q92499 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC23.16■■□□□ 1.3
DDX1Q92499 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.16■■□□□ 1.3
DDX1Q92499 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC23.16■■□□□ 1.3
DDX1Q92499 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX1Q92499 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
DDX1Q92499 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 PLD4-205ENST00000553861 667 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX1Q92499 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
DDX1Q92499 AL136967.2-201ENST00000623968 743 ntBASIC23.15■■□□□ 1.3
DDX1Q92499 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC23.15■■□□□ 1.3
DDX1Q92499 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
DDX1Q92499 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.15■■□□□ 1.3
DDX1Q92499 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
DDX1Q92499 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX1Q92499 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.3
DDX1Q92499 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
DDX1Q92499 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX1Q92499 SNX3-202ENST00000349379 890 ntTSL 2 BASIC23.14■■□□□ 1.29
DDX1Q92499 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX1Q92499 SLC47A1P1-202ENST00000449666 945 ntBASIC23.14■■□□□ 1.29
DDX1Q92499 AC079089.2-201ENST00000531211 1277 ntBASIC23.14■■□□□ 1.29
DDX1Q92499 AC024257.2-201ENST00000549699 147 ntBASIC23.14■■□□□ 1.29
DDX1Q92499 AC068587.7-201ENST00000641602 218 ntBASIC23.14■■□□□ 1.29
DDX1Q92499 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX1Q92499 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
DDX1Q92499 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
DDX1Q92499 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
DDX1Q92499 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
DDX1Q92499 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
DDX1Q92499 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
DDX1Q92499 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.13■■□□□ 1.29
DDX1Q92499 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.13■■□□□ 1.29
DDX1Q92499 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
DDX1Q92499 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC23.12■■□□□ 1.29
DDX1Q92499 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
DDX1Q92499 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.12■■□□□ 1.29
DDX1Q92499 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms