Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SMIM4Q8WVI0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 AL592293.1-201ENST00000502889 1188 ntBASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
SMIM4Q8WVI0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SMIM4Q8WVI0 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SMIM4Q8WVI0 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AC007952.6-201ENST00000573168 2673 ntBASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AC003957.1-201ENST00000625108 2673 ntBASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AC022616.5-201ENST00000518796 181 ntBASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.51■□□□□ 0.55
SMIM4Q8WVI0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 MIR639-201ENST00000384974 98 ntBASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 AC009086.3-201ENST00000623486 1008 ntBASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.5■□□□□ 0.55
SMIM4Q8WVI0 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 DUX4L9-201ENST00000449051 1259 ntBASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 FP325331.1-202ENST00000623531 1380 ntBASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.49■□□□□ 0.55
SMIM4Q8WVI0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 FEM1AP1-201ENST00000431297 1995 ntBASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 GPX1-201ENST00000419349 1106 ntBASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 RNF165-205ENST00000588679 2904 ntBASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SMIM4Q8WVI0 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
SMIM4Q8WVI0 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms