Protein–RNA interactions for Protein: Q8WUE5

CT55, Cancer/testis antigen 55, humanhuman

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CT55Q8WUE5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.33■□□□□ 0.85
CT55Q8WUE5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CT55Q8WUE5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC20.33■□□□□ 0.85
CT55Q8WUE5 CROCCP5-201ENST00000436658 830 ntBASIC20.33■□□□□ 0.85
CT55Q8WUE5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.33■□□□□ 0.85
CT55Q8WUE5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.33■□□□□ 0.84
CT55Q8WUE5 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CT55Q8WUE5 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CT55Q8WUE5 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CT55Q8WUE5 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
CT55Q8WUE5 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CT55Q8WUE5 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CT55Q8WUE5 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CT55Q8WUE5 LINC01960-201ENST00000563759 1884 ntBASIC20.32■□□□□ 0.84
CT55Q8WUE5 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CT55Q8WUE5 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CT55Q8WUE5 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.31■□□□□ 0.84
CT55Q8WUE5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.31■□□□□ 0.84
CT55Q8WUE5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CT55Q8WUE5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.3■□□□□ 0.84
CT55Q8WUE5 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.3■□□□□ 0.84
CT55Q8WUE5 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC20.3■□□□□ 0.84
CT55Q8WUE5 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CT55Q8WUE5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 MIR663A-201ENST00000385250 93 ntBASIC20.3■□□□□ 0.84
CT55Q8WUE5 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 AC079089.2-201ENST00000531211 1277 ntBASIC20.3■□□□□ 0.84
CT55Q8WUE5 MFSD11-216ENST00000590393 1141 ntBASIC20.3■□□□□ 0.84
CT55Q8WUE5 AC104771.1-201ENST00000603335 964 ntBASIC20.3■□□□□ 0.84
CT55Q8WUE5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CT55Q8WUE5 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CT55Q8WUE5 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CT55Q8WUE5 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.28■□□□□ 0.84
CT55Q8WUE5 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CT55Q8WUE5 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CT55Q8WUE5 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CT55Q8WUE5 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CT55Q8WUE5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.27■□□□□ 0.84
CT55Q8WUE5 AL109923.1-201ENST00000618799 583 ntBASIC20.27■□□□□ 0.84
CT55Q8WUE5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.27■□□□□ 0.84
CT55Q8WUE5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CT55Q8WUE5 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.27■□□□□ 0.83
CT55Q8WUE5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
CT55Q8WUE5 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CT55Q8WUE5 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CT55Q8WUE5 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CT55Q8WUE5 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CT55Q8WUE5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CT55Q8WUE5 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.26■□□□□ 0.83
CT55Q8WUE5 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms