Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
SH3RF3Q8TEJ3 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 AC006015.1-201ENST00000429970 570 ntBASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 AC079140.4-201ENST00000507448 529 ntBASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 DBI-210ENST00000542275 757 ntTSL 5 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 VPS53-216ENST00000574029 585 ntTSL 4 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SH3RF3Q8TEJ3 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 AC137761.2-201ENST00000561729 223 ntBASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 AC145350.3-201ENST00000569033 163 ntBASIC25.89■■□□□ 1.74
SH3RF3Q8TEJ3 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC25.89■■□□□ 1.73
SH3RF3Q8TEJ3 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC25.89■■□□□ 1.73
SH3RF3Q8TEJ3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 DUSP8P5-201ENST00000422884 1815 ntBASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
SH3RF3Q8TEJ3 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 GCA-201ENST00000233612 1694 ntTSL 2 BASIC25.87■■□□□ 1.73
SH3RF3Q8TEJ3 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 AC009237.3-201ENST00000393279 1427 ntBASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
SH3RF3Q8TEJ3 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 TESC-206ENST00000541210 936 ntTSL 3 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 LINC00526-201ENST00000581067 1875 ntBASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
SH3RF3Q8TEJ3 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 AC016769.1-201ENST00000409132 1010 ntBASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SH3RF3Q8TEJ3 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 AC087742.1-201ENST00000575880 1738 ntBASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 HSCB-202ENST00000398941 955 ntTSL 2 BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
SH3RF3Q8TEJ3 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.72
SH3RF3Q8TEJ3 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.72
SH3RF3Q8TEJ3 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.72
SH3RF3Q8TEJ3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 COMT-203ENST00000403184 2217 ntTSL 2 BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 KRT19P1-201ENST00000405746 1186 ntBASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SH3RF3Q8TEJ3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms