Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
DNAAF1Q8NEP3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 DUX4L4-201ENST00000566884 1269 ntBASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 MTDHP2-201ENST00000601468 714 ntBASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 MIR4787-201ENST00000607364 84 ntBASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
DNAAF1Q8NEP3 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.98■□□□□ 0.63
DNAAF1Q8NEP3 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 EXOG-217ENST00000630638 197 ntTSL 5 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
DNAAF1Q8NEP3 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 RARRES2P1-201ENST00000474487 481 ntBASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 AC009086.3-201ENST00000623486 1008 ntBASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
DNAAF1Q8NEP3 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
DNAAF1Q8NEP3 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 CD72-202ENST00000378430 585 ntTSL 3 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 TFPT-201ENST00000391757 774 ntTSL 5 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 AC239859.2-201ENST00000444165 318 ntBASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 AC010997.5-201ENST00000609182 354 ntBASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
DNAAF1Q8NEP3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNAAF1Q8NEP3 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.93■□□□□ 0.62
DNAAF1Q8NEP3 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
DNAAF1Q8NEP3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms