Protein–RNA interactions for Protein: Q8N1B4

VPS52, Vacuolar protein sorting-associated protein 52 homolog, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52Q8N1B4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 AC068587.7-201ENST00000641602 218 ntBASIC23.47■■□□□ 1.35
VPS52Q8N1B4 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 DUSP8P5-201ENST00000422884 1815 ntBASIC23.47■■□□□ 1.35
VPS52Q8N1B4 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
VPS52Q8N1B4 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.46■■□□□ 1.35
VPS52Q8N1B4 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
VPS52Q8N1B4 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
VPS52Q8N1B4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 AP004607.4-201ENST00000530158 1459 ntBASIC23.45■■□□□ 1.34
VPS52Q8N1B4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 HLA-L-209ENST00000420110 1011 ntBASIC23.45■■□□□ 1.34
VPS52Q8N1B4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
VPS52Q8N1B4 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 AC004854.2-201ENST00000608450 1441 ntBASIC23.44■■□□□ 1.34
VPS52Q8N1B4 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 STX7-201ENST00000367937 1090 ntTSL 5 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.44■■□□□ 1.34
VPS52Q8N1B4 AC068473.5-201ENST00000616428 2072 ntBASIC23.44■■□□□ 1.34
VPS52Q8N1B4 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 AL353803.4-201ENST00000565882 1934 ntBASIC23.43■■□□□ 1.34
VPS52Q8N1B4 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 DBI-210ENST00000542275 757 ntTSL 5 BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 AC087239.1-201ENST00000622671 572 ntBASIC23.43■■□□□ 1.34
VPS52Q8N1B4 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
VPS52Q8N1B4 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 AC010141.3-201ENST00000456659 717 ntBASIC23.42■■□□□ 1.34
VPS52Q8N1B4 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 DENND3-207ENST00000518347 850 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
VPS52Q8N1B4 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 HSCB-202ENST00000398941 955 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 SMUG1P1-201ENST00000590640 811 ntBASIC23.41■■□□□ 1.34
VPS52Q8N1B4 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
VPS52Q8N1B4 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 CDCA4P2-201ENST00000441182 718 ntBASIC23.4■■□□□ 1.34
VPS52Q8N1B4 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
VPS52Q8N1B4 GAS2L1P2-201ENST00000436355 1356 ntBASIC23.4■■□□□ 1.34
VPS52Q8N1B4 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
VPS52Q8N1B4 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.39■■□□□ 1.33
VPS52Q8N1B4 RAP2CP1-201ENST00000605103 478 ntBASIC23.39■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms