Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 STK32C-205ENST00000456004 607 ntTSL 2 BASIC21.32■■□□□ 1
APLFQ8IW19 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.32■■□□□ 1
APLFQ8IW19 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
APLFQ8IW19 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
APLFQ8IW19 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
APLFQ8IW19 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.31■■□□□ 1
APLFQ8IW19 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC21.31■■□□□ 1
APLFQ8IW19 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
APLFQ8IW19 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.31■■□□□ 1
APLFQ8IW19 MIR4767-201ENST00000582827 78 ntBASIC21.31■■□□□ 1
APLFQ8IW19 MIR6821-201ENST00000617625 74 ntBASIC21.31■■□□□ 1
APLFQ8IW19 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
APLFQ8IW19 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
APLFQ8IW19 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC21.31■■□□□ 1
APLFQ8IW19 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.3■■□□□ 1
APLFQ8IW19 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.3■■□□□ 1
APLFQ8IW19 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC21.3■■□□□ 1
APLFQ8IW19 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
APLFQ8IW19 AL138724.1-201ENST00000606771 1088 ntBASIC21.3■■□□□ 1
APLFQ8IW19 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.3■■□□□ 1
APLFQ8IW19 RASA4CP-201ENST00000424092 1398 ntBASIC21.3■■□□□ 1
APLFQ8IW19 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC21.3■■□□□ 1
APLFQ8IW19 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
APLFQ8IW19 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
APLFQ8IW19 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
APLFQ8IW19 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.29■■□□□ 1
APLFQ8IW19 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.29■■□□□ 1
APLFQ8IW19 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
APLFQ8IW19 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.29■■□□□ 1
APLFQ8IW19 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
APLFQ8IW19 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
APLFQ8IW19 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC21.29■■□□□ 1
APLFQ8IW19 AC131274.2-201ENST00000580697 1507 ntBASIC21.29■■□□□ 1
APLFQ8IW19 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC21.28■■□□□ 1
APLFQ8IW19 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APLFQ8IW19 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
APLFQ8IW19 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.28■■□□□ 1
APLFQ8IW19 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.28■■□□□ 1
APLFQ8IW19 ANOS2P-203ENST00000472227 1816 ntBASIC21.28■■□□□ 1
APLFQ8IW19 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
APLFQ8IW19 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
APLFQ8IW19 SERBP1P1-201ENST00000396021 1160 ntBASIC21.28■■□□□ 1
APLFQ8IW19 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.28■■□□□ 1
APLFQ8IW19 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.28■■□□□ 1
APLFQ8IW19 AC011298.3-201ENST00000615796 283 ntBASIC21.28■■□□□ 1
APLFQ8IW19 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.28■■□□□ 1
APLFQ8IW19 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
APLFQ8IW19 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
APLFQ8IW19 AC007952.6-201ENST00000573168 2673 ntBASIC21.28■■□□□ 1
APLFQ8IW19 AC003957.1-201ENST00000625108 2673 ntBASIC21.28■■□□□ 1
APLFQ8IW19 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC21.28■■□□□ 1
APLFQ8IW19 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 AC092068.2-201ENST00000590491 1708 ntBASIC21.27■■□□□ 1
APLFQ8IW19 AC097381.1-201ENST00000429019 1296 ntBASIC21.27■■□□□ 1
APLFQ8IW19 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
APLFQ8IW19 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
APLFQ8IW19 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.27■■□□□ 1
APLFQ8IW19 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
APLFQ8IW19 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
APLFQ8IW19 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 ESRRAP2-201ENST00000418437 1549 ntBASIC21.26■□□□□ 0.99
APLFQ8IW19 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC21.26■□□□□ 0.99
APLFQ8IW19 AC027682.1-201ENST00000562846 899 ntBASIC21.26■□□□□ 0.99
APLFQ8IW19 CA15P2-201ENST00000611168 834 ntBASIC21.26■□□□□ 0.99
APLFQ8IW19 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
APLFQ8IW19 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
APLFQ8IW19 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms