Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
NUDCD3Q8IVD9 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 GUK1-208ENST00000366728 842 ntTSL 2 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 AC103834.1-201ENST00000520383 144 ntBASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NUDCD3Q8IVD9 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 AC103724.3-201ENST00000564481 992 ntBASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
NUDCD3Q8IVD9 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 TUB-203ENST00000534099 1759 ntTSL 2 BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NUDCD3Q8IVD9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
NUDCD3Q8IVD9 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 NKILA-201ENST00000613231 537 ntTSL 4 BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 Z98882.1-201ENST00000622160 2253 ntBASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NUDCD3Q8IVD9 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 YBX1P4-201ENST00000392794 808 ntBASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.44■■□□□ 1.02
NUDCD3Q8IVD9 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 KRT8P33-201ENST00000508125 1423 ntBASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
NUDCD3Q8IVD9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
NUDCD3Q8IVD9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUDCD3Q8IVD9 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC21.42■■□□□ 1.02
NUDCD3Q8IVD9 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
NUDCD3Q8IVD9 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.42■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms