Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CRLF3Q8IUI8 SLC25A24-204ENST00000569674 2357 ntBASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 MTDHP2-201ENST00000601468 714 ntBASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 AC010997.5-201ENST00000609182 354 ntBASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
CRLF3Q8IUI8 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 REST-206ENST00000612429 1376 ntTSL 5 BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 REST-207ENST00000616975 1370 ntTSL 5 BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 LINC01960-201ENST00000563759 1884 ntBASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.55■■□□□ 1.04
CRLF3Q8IUI8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 LINC01529-204ENST00000636474 1715 ntBASIC21.54■■□□□ 1.04
CRLF3Q8IUI8 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 AC005229.4-201ENST00000610085 2198 ntBASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 CLTA-210ENST00000540080 989 ntTSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CRLF3Q8IUI8 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CRLF3Q8IUI8 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.52■■□□□ 1.03
CRLF3Q8IUI8 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CRLF3Q8IUI8 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 AC244015.2-201ENST00000616358 1861 ntBASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CRLF3Q8IUI8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 AC008406.3-201ENST00000620001 1374 ntBASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 LSM4-201ENST00000252816 986 ntTSL 2 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.49■■□□□ 1.03
CRLF3Q8IUI8 MIR6724-1-201ENST00000616420 92 ntBASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms