Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 AC073130.3-201ENST00000624389 2278 ntBASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
LINC00242Q5T6M2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 AC137630.3-201ENST00000607245 391 ntBASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
LINC00242Q5T6M2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.79□□□□□ -0.04
LINC00242Q5T6M2 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 TSPY13P-201ENST00000338964 914 ntBASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 FEM1AP4-201ENST00000443167 1987 ntBASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LINC00242Q5T6M2 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.77□□□□□ -0.04
LINC00242Q5T6M2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 BRD4-212ENST00000630599 726 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 AF106564.1-201ENST00000607058 2553 ntBASIC14.77□□□□□ -0.05
LINC00242Q5T6M2 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.76□□□□□ -0.05
LINC00242Q5T6M2 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms