Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 TFPT-201ENST00000391757 774 ntTSL 5 BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
PDCD4Q53EL6 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 AC092667.1-201ENST00000434301 2586 ntBASIC20.79■□□□□ 0.92
PDCD4Q53EL6 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PDCD4Q53EL6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PDCD4Q53EL6 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PDCD4Q53EL6 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDCD4Q53EL6 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
PDCD4Q53EL6 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 MIR4787-201ENST00000607364 84 ntBASIC20.76■□□□□ 0.91
PDCD4Q53EL6 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.76■□□□□ 0.91
PDCD4Q53EL6 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 AC010997.5-201ENST00000609182 354 ntBASIC20.75■□□□□ 0.91
PDCD4Q53EL6 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PDCD4Q53EL6 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PDCD4Q53EL6 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
PDCD4Q53EL6 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms