Protein–RNA interactions for Protein: Q495X7

TRIM60, Tripartite motif-containing protein 60, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM60Q495X7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC24.04■■□□□ 1.44
TRIM60Q495X7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
TRIM60Q495X7 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC24.04■■□□□ 1.44
TRIM60Q495X7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.03■■□□□ 1.44
TRIM60Q495X7 PXK-203ENST00000383715 1756 ntTSL 5 BASIC24.03■■□□□ 1.44
TRIM60Q495X7 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC24.03■■□□□ 1.44
TRIM60Q495X7 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC24.03■■□□□ 1.44
TRIM60Q495X7 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.03■■□□□ 1.44
TRIM60Q495X7 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TRIM60Q495X7 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM60Q495X7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM60Q495X7 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
TRIM60Q495X7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 AC010536.3-201ENST00000620306 533 ntBASIC24.02■■□□□ 1.44
TRIM60Q495X7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 AL353803.4-201ENST00000565882 1934 ntBASIC24.02■■□□□ 1.44
TRIM60Q495X7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.02■■□□□ 1.44
TRIM60Q495X7 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC24.01■■□□□ 1.43
TRIM60Q495X7 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM60Q495X7 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC24.01■■□□□ 1.43
TRIM60Q495X7 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC24.01■■□□□ 1.43
TRIM60Q495X7 MIR4758-201ENST00000577688 71 ntBASIC24.01■■□□□ 1.43
TRIM60Q495X7 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM60Q495X7 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM60Q495X7 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
TRIM60Q495X7 MFF-207ENST00000409565 1548 ntTSL 2 BASIC24■■□□□ 1.43
TRIM60Q495X7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM60Q495X7 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TRIM60Q495X7 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24■■□□□ 1.43
TRIM60Q495X7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
TRIM60Q495X7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 RPS2P52-201ENST00000469610 820 ntBASIC23.99■■□□□ 1.43
TRIM60Q495X7 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM60Q495X7 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM60Q495X7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
TRIM60Q495X7 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TRIM60Q495X7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM60Q495X7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC23.98■■□□□ 1.43
TRIM60Q495X7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
TRIM60Q495X7 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
TRIM60Q495X7 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM60Q495X7 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM60Q495X7 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM60Q495X7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM60Q495X7 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC23.97■■□□□ 1.43
TRIM60Q495X7 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TRIM60Q495X7 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM60Q495X7 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM60Q495X7 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM60Q495X7 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
TRIM60Q495X7 MIPEPP3-201ENST00000412105 444 ntBASIC23.96■■□□□ 1.43
TRIM60Q495X7 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC23.96■■□□□ 1.43
TRIM60Q495X7 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
TRIM60Q495X7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.43
TRIM60Q495X7 AC138932.3-201ENST00000567634 1902 ntBASIC23.95■■□□□ 1.42
TRIM60Q495X7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
TRIM60Q495X7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC23.95■■□□□ 1.42
TRIM60Q495X7 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
TRIM60Q495X7 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM60Q495X7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC23.94■■□□□ 1.42
TRIM60Q495X7 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.94■■□□□ 1.42
TRIM60Q495X7 UQCRFS1P1-201ENST00000435169 820 ntBASIC23.94■■□□□ 1.42
TRIM60Q495X7 AC010141.2-201ENST00000452426 721 ntBASIC23.94■■□□□ 1.42
TRIM60Q495X7 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.94■■□□□ 1.42
TRIM60Q495X7 SLC7A5P1-201ENST00000568957 537 ntBASIC23.94■■□□□ 1.42
TRIM60Q495X7 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC23.94■■□□□ 1.42
TRIM60Q495X7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM60Q495X7 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 AC098590.1-201ENST00000468126 897 ntBASIC23.93■■□□□ 1.42
TRIM60Q495X7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC23.93■■□□□ 1.42
TRIM60Q495X7 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.93■■□□□ 1.42
TRIM60Q495X7 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC23.93■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms