Protein–RNA interactions for Protein: Q12112

TY1B-NL1, Transposon Ty1-NL1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-NL1Q12112 RTT103YDR289C 1230 nt4.04□□□□□ -1.76
TY1B-NL1Q12112 DHH1YDL160C 1521 nt4.04□□□□□ -1.76
TY1B-NL1Q12112 YAL037WYAL037W 804 nt4.03□□□□□ -1.76
TY1B-NL1Q12112 KRI1YNL308C 1776 nt4.03□□□□□ -1.76
TY1B-NL1Q12112 SRC1YML034W 2505 nt4.03□□□□□ -1.76
TY1B-NL1Q12112 TSR1YDL060W 2367 nt4.03□□□□□ -1.76
TY1B-NL1Q12112 ABP140YOR239W 1887 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 HPC2YBR215W 1878 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 YGK3YOL128C 1128 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 KIP1YBL063W 3336 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 FCF1YDR339C 570 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 YLR177WYLR177W 1887 nt4.02□□□□□ -1.77
TY1B-NL1Q12112 AUS1YOR011W 4185 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 GCD6YDR211W 2139 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 YHR213WYHR213W 597 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 YLR036CYLR036C 612 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 YAR062WYAR062W 597 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 YML119WYML119W 1074 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 TDA11YHR159W 1515 nt4.01□□□□□ -1.77
TY1B-NL1Q12112 PHD1YKL043W 1101 nt4□□□□□ -1.77
TY1B-NL1Q12112 LDS2YOL047C 1071 nt4□□□□□ -1.77
TY1B-NL1Q12112 PEP1YBL017C 4740 nt4□□□□□ -1.77
TY1B-NL1Q12112 BEM4YPL161C 1902 nt4□□□□□ -1.77
TY1B-NL1Q12112 GSM1YJL103C 1857 nt4□□□□□ -1.77
TY1B-NL1Q12112 SEN1YLR430W 6696 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 SSY1YDR160W 2559 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 MAF1YDR005C 1188 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 PAU14YIL176C 363 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 FMP33YJL161W 543 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 PAU1YJL223C 363 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 YOR050CYOR050C 348 nt3.99□□□□□ -1.77
TY1B-NL1Q12112 TYR1YBR166C 1359 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 BCK1YJL095W 4437 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 GRX6YDL010W 696 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 YDL124WYDL124W 939 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 YKL169CYKL169C 384 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 FUN12YAL035W 3009 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 YLR352WYLR352W 2424 nt3.98□□□□□ -1.77
TY1B-NL1Q12112 PTR2YKR093W 1806 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 LAC1YKL008C 1257 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 YMR082CYMR082C 357 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 RPL33AYPL143W 324 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 RGR1YLR071C 3249 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 YLR152CYLR152C 1731 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 RIM4YHL024W 2142 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 TFB4YPR056W 1017 nt3.97□□□□□ -1.77
TY1B-NL1Q12112 CDC6YJL194W 1542 nt3.96□□□□□ -1.77
TY1B-NL1Q12112 SSQ1YLR369W 1974 nt3.96□□□□□ -1.78
TY1B-NL1Q12112 YCR101CYCR101C 549 nt3.96□□□□□ -1.78
TY1B-NL1Q12112 VTC1YER072W 390 nt3.96□□□□□ -1.78
TY1B-NL1Q12112 PRE2YPR103W 864 nt3.96□□□□□ -1.78
TY1B-NL1Q12112 FRE1YLR214W 2061 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 HOS3YPL116W 2094 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 TRE2YOR256C 2430 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 DAP2YHR028C 2457 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 YIL163CYIL163C 354 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 YKR033CYKR033C 426 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 YLR255CYLR255C 354 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 DGK1YOR311C 873 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 RIB5YBR256C 717 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 MRPL37YBR268W 318 nt3.95□□□□□ -1.78
TY1B-NL1Q12112 PMR1YGL167C 2853 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 FMP41YNL168C 780 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 YOR300WYOR300W 309 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 YBR141W-AYBR141W-A 96 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 RNT1YMR239C 1416 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 SFH5YJL145W 885 nt3.94□□□□□ -1.78
TY1B-NL1Q12112 PTI1YGR156W 1278 nt3.93□□□□□ -1.78
TY1B-NL1Q12112 RBL2YOR265W 321 nt3.93□□□□□ -1.78
TY1B-NL1Q12112 URK1YNR012W 1506 nt3.93□□□□□ -1.78
TY1B-NL1Q12112 YDR061WYDR061W 1620 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 MCA1YOR197W 1299 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 RRD2YPL152W 1077 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 SPO71YDR104C 3738 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 UBP15YMR304W 3693 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 MBP1YDL056W 2502 nt3.92□□□□□ -1.78
TY1B-NL1Q12112 YPL039WYPL039W 951 nt3.91□□□□□ -1.78
TY1B-NL1Q12112 DIM1YPL266W 957 nt3.91□□□□□ -1.78
TY1B-NL1Q12112 YLL017WYLL017W 312 nt3.91□□□□□ -1.78
TY1B-NL1Q12112 MIC27YNL100W 705 nt3.91□□□□□ -1.78
TY1B-NL1Q12112 DGA1YOR245C 1257 nt3.91□□□□□ -1.78
TY1B-NL1Q12112 TRK1YJL129C 3708 nt3.9□□□□□ -1.78
TY1B-NL1Q12112 YCR045W-AYCR045W-A 351 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 YIL102C-AYIL102C-A 228 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 PSY1YKL076C 384 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 RSA1YPL193W 1146 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 AXL1YPR122W 3627 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 SEO1YAL067C 1782 nt3.9□□□□□ -1.79
TY1B-NL1Q12112 END3YNL084C 1050 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 PUT3YKL015W 2940 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 MDM38YOL027C 1722 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 YHR080CYHR080C 4038 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 RPB8YOR224C 441 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 MSB1YOR188W 3414 nt3.89□□□□□ -1.79
TY1B-NL1Q12112 APL5YPL195W 2799 nt3.88□□□□□ -1.79
TY1B-NL1Q12112 SWP1YMR149W 861 nt3.88□□□□□ -1.79
TY1B-NL1Q12112 ATP12YJL180C 978 nt3.87□□□□□ -1.79
TY1B-NL1Q12112 YBR242WYBR242W 717 nt3.87□□□□□ -1.79
TY1B-NL1Q12112 INP52YNL106C 3552 nt3.87□□□□□ -1.79
TY1B-NL1Q12112 SPT4YGR063C 309 nt3.86□□□□□ -1.79
Retrieved 100 of 7,029 protein–RNA pairs in 27 ms