Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
HMGCS1Q01581 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.87■□□□□ 0.93
HMGCS1Q01581 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
HMGCS1Q01581 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCS1Q01581 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCS1Q01581 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.86■□□□□ 0.93
HMGCS1Q01581 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 FAM99A-202ENST00000538190 1989 ntBASIC20.86■□□□□ 0.93
HMGCS1Q01581 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
HMGCS1Q01581 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
HMGCS1Q01581 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 AC131212.1-201ENST00000613771 668 ntBASIC20.85■□□□□ 0.93
HMGCS1Q01581 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.85■□□□□ 0.93
HMGCS1Q01581 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
HMGCS1Q01581 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC20.84■□□□□ 0.93
HMGCS1Q01581 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.84■□□□□ 0.93
HMGCS1Q01581 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
HMGCS1Q01581 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
HMGCS1Q01581 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 MIR4466-201ENST00000606121 54 ntBASIC20.83■□□□□ 0.93
HMGCS1Q01581 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.83■□□□□ 0.93
HMGCS1Q01581 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS1Q01581 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS1Q01581 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS1Q01581 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS1Q01581 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HMGCS1Q01581 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HMGCS1Q01581 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.82■□□□□ 0.92
HMGCS1Q01581 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms