Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SIRPAP78324 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SIRPAP78324 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
SIRPAP78324 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SIRPAP78324 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC19.72■□□□□ 0.75
SIRPAP78324 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SIRPAP78324 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC19.72■□□□□ 0.75
SIRPAP78324 MYB-221ENST00000527615 2381 ntTSL 5 BASIC19.72■□□□□ 0.75
SIRPAP78324 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC19.71■□□□□ 0.75
SIRPAP78324 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SIRPAP78324 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
SIRPAP78324 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC19.71■□□□□ 0.75
SIRPAP78324 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.71■□□□□ 0.75
SIRPAP78324 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SIRPAP78324 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC19.71■□□□□ 0.75
SIRPAP78324 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 AL353803.4-201ENST00000565882 1934 ntBASIC19.7■□□□□ 0.74
SIRPAP78324 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SIRPAP78324 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SIRPAP78324 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.7■□□□□ 0.74
SIRPAP78324 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SIRPAP78324 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC19.7■□□□□ 0.74
SIRPAP78324 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.7■□□□□ 0.74
SIRPAP78324 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
SIRPAP78324 AC010525.1-201ENST00000585559 441 ntBASIC19.7■□□□□ 0.74
SIRPAP78324 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SIRPAP78324 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SIRPAP78324 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.7■□□□□ 0.74
SIRPAP78324 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
SIRPAP78324 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.69■□□□□ 0.74
SIRPAP78324 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.69■□□□□ 0.74
SIRPAP78324 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.69■□□□□ 0.74
SIRPAP78324 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.69■□□□□ 0.74
SIRPAP78324 RARRES2P6-201ENST00000567333 442 ntBASIC19.69■□□□□ 0.74
SIRPAP78324 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.69■□□□□ 0.74
SIRPAP78324 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.69■□□□□ 0.74
SIRPAP78324 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SIRPAP78324 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SIRPAP78324 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SIRPAP78324 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC19.68■□□□□ 0.74
SIRPAP78324 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC19.68■□□□□ 0.74
SIRPAP78324 AC007375.3-201ENST00000600936 2314 ntBASIC19.68■□□□□ 0.74
SIRPAP78324 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.68■□□□□ 0.74
SIRPAP78324 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC19.68■□□□□ 0.74
SIRPAP78324 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC19.68■□□□□ 0.74
SIRPAP78324 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 TSPY26P-201ENST00000476365 1326 ntBASIC19.68■□□□□ 0.74
SIRPAP78324 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SIRPAP78324 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIRPAP78324 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC19.67■□□□□ 0.74
SIRPAP78324 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIRPAP78324 PKD1P6-201ENST00000343738 4769 ntBASIC19.67■□□□□ 0.74
SIRPAP78324 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.67■□□□□ 0.74
SIRPAP78324 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIRPAP78324 IRS3P-201ENST00000223076 1006 ntBASIC19.67■□□□□ 0.74
SIRPAP78324 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SIRPAP78324 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.67■□□□□ 0.74
SIRPAP78324 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.67■□□□□ 0.74
SIRPAP78324 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.67■□□□□ 0.74
SIRPAP78324 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SIRPAP78324 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
SIRPAP78324 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SIRPAP78324 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SIRPAP78324 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 12.4 ms