Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RPS3AP61247 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
RPS3AP61247 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.18■□□□□ 0.82
RPS3AP61247 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 AC242852.2-201ENST00000615738 1807 ntBASIC20.18■□□□□ 0.82
RPS3AP61247 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 GGTA1P-203ENST00000481799 1487 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RPS3AP61247 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 UNC93B3-201ENST00000308076 687 ntBASIC20.17■□□□□ 0.82
RPS3AP61247 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS3AP61247 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.17■□□□□ 0.82
RPS3AP61247 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS3AP61247 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20.17■□□□□ 0.82
RPS3AP61247 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RPS3AP61247 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RPS3AP61247 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
RPS3AP61247 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.16■□□□□ 0.82
RPS3AP61247 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.16■□□□□ 0.82
RPS3AP61247 AC009086.3-201ENST00000623486 1008 ntBASIC20.16■□□□□ 0.82
RPS3AP61247 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
RPS3AP61247 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
RPS3AP61247 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.16■□□□□ 0.82
RPS3AP61247 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RPS3AP61247 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS3AP61247 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RPS3AP61247 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC20.15■□□□□ 0.82
RPS3AP61247 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS3AP61247 AC110285.6-201ENST00000617652 491 ntBASIC20.15■□□□□ 0.82
RPS3AP61247 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS3AP61247 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RPS3AP61247 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.15■□□□□ 0.82
RPS3AP61247 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.15■□□□□ 0.82
RPS3AP61247 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RPS3AP61247 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.14■□□□□ 0.82
RPS3AP61247 AL391422.3-201ENST00000603791 2761 ntBASIC20.14■□□□□ 0.82
RPS3AP61247 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RPS3AP61247 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
RPS3AP61247 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS3AP61247 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RPS3AP61247 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS3AP61247 PBX2P1-201ENST00000493219 1291 ntBASIC20.14■□□□□ 0.81
RPS3AP61247 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 AL136162.1-201ENST00000607711 1078 ntBASIC20.14■□□□□ 0.81
RPS3AP61247 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RPS3AP61247 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.14■□□□□ 0.81
RPS3AP61247 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.14■□□□□ 0.81
RPS3AP61247 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RPS3AP61247 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.13■□□□□ 0.81
RPS3AP61247 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS3AP61247 FP325331.1-202ENST00000623531 1380 ntBASIC20.13■□□□□ 0.81
RPS3AP61247 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS3AP61247 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPS3AP61247 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS3AP61247 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC20.13■□□□□ 0.81
RPS3AP61247 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC20.13■□□□□ 0.81
RPS3AP61247 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPS3AP61247 AL138724.1-201ENST00000606771 1088 ntBASIC20.13■□□□□ 0.81
RPS3AP61247 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC20.13■□□□□ 0.81
RPS3AP61247 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.13■□□□□ 0.81
RPS3AP61247 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPS3AP61247 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS3AP61247 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS3AP61247 IDH2-202ENST00000540499 1453 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS3AP61247 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS3AP61247 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.12■□□□□ 0.81
RPS3AP61247 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.12■□□□□ 0.81
RPS3AP61247 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS3AP61247 AC135279.3-201ENST00000610945 1311 ntBASIC20.12■□□□□ 0.81
RPS3AP61247 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPS3AP61247 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms