Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 GCA-201ENST00000233612 1694 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC13.68□□□□□ -0.22
UBE2AP49459 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
UBE2AP49459 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
UBE2AP49459 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2AP49459 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
UBE2AP49459 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2AP49459 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC13.67□□□□□ -0.22
UBE2AP49459 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC13.67□□□□□ -0.22
UBE2AP49459 OR2A1-AS1-204ENST00000470435 602 ntBASIC13.67□□□□□ -0.22
UBE2AP49459 UNC93B8-201ENST00000511903 705 ntBASIC13.67□□□□□ -0.22
UBE2AP49459 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC13.67□□□□□ -0.22
UBE2AP49459 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2AP49459 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
UBE2AP49459 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
UBE2AP49459 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
UBE2AP49459 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 GUSBP5-202ENST00000510805 1989 ntBASIC13.66□□□□□ -0.22
UBE2AP49459 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC13.66□□□□□ -0.22
UBE2AP49459 ASB1-202ENST00000409297 878 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2AP49459 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2AP49459 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2AP49459 AL356740.2-201ENST00000601559 647 ntBASIC13.66□□□□□ -0.22
UBE2AP49459 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
UBE2AP49459 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2AP49459 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC13.66□□□□□ -0.22
UBE2AP49459 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
UBE2AP49459 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC13.66□□□□□ -0.22
UBE2AP49459 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2AP49459 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC13.65□□□□□ -0.22
UBE2AP49459 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2AP49459 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 DUX4L4-201ENST00000566884 1269 ntBASIC13.65□□□□□ -0.22
UBE2AP49459 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.65□□□□□ -0.22
UBE2AP49459 TRIR-205ENST00000592273 783 ntTSL 3 BASIC13.65□□□□□ -0.22
UBE2AP49459 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBE2AP49459 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
UBE2AP49459 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
UBE2AP49459 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 STK25-234ENST00000535007 2459 ntTSL 2 BASIC13.65□□□□□ -0.22
UBE2AP49459 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
UBE2AP49459 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
UBE2AP49459 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UBE2AP49459 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 EP400NL-214ENST00000641289 2402 ntBASIC13.64□□□□□ -0.23
UBE2AP49459 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UBE2AP49459 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC13.64□□□□□ -0.23
UBE2AP49459 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
UBE2AP49459 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms