Protein–RNA interactions for Protein: P47098

TY1B-JR1, Transposon Ty1-JR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,755 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-JR1P47098 VTC3YPL019C 2508 nt4.12□□□□□ -1.75
TY1B-JR1P47098 ABP140YOR239W 1887 nt4.12□□□□□ -1.75
TY1B-JR1P47098 FMP25YLR077W 1752 nt4.12□□□□□ -1.75
TY1B-JR1P47098 YAL037WYAL037W 804 nt4.12□□□□□ -1.75
TY1B-JR1P47098 RHO5YNL180C 996 nt4.12□□□□□ -1.75
TY1B-JR1P47098 PEP1YBL017C 4740 nt4.11□□□□□ -1.75
TY1B-JR1P47098 YLR177WYLR177W 1887 nt4.11□□□□□ -1.75
TY1B-JR1P47098 HPC2YBR215W 1878 nt4.11□□□□□ -1.75
TY1B-JR1P47098 TFB4YPR056W 1017 nt4.11□□□□□ -1.75
TY1B-JR1P47098 DHH1YDL160C 1521 nt4.1□□□□□ -1.75
TY1B-JR1P47098 SDH3YKL141W 597 nt4.1□□□□□ -1.75
TY1B-JR1P47098 SSY1YDR160W 2559 nt4.1□□□□□ -1.75
TY1B-JR1P47098 KRI1YNL308C 1776 nt4.1□□□□□ -1.75
TY1B-JR1P47098 HOS3YPL116W 2094 nt4.1□□□□□ -1.75
TY1B-JR1P47098 RTT103YDR289C 1230 nt4.09□□□□□ -1.75
TY1B-JR1P47098 FMP33YJL161W 543 nt4.09□□□□□ -1.75
TY1B-JR1P47098 YLR036CYLR036C 612 nt4.09□□□□□ -1.75
TY1B-JR1P47098 YLR152CYLR152C 1731 nt4.09□□□□□ -1.75
TY1B-JR1P47098 RGR1YLR071C 3249 nt4.09□□□□□ -1.75
TY1B-JR1P47098 YKL169CYKL169C 384 nt4.09□□□□□ -1.76
TY1B-JR1P47098 YHR213WYHR213W 597 nt4.08□□□□□ -1.76
TY1B-JR1P47098 PAU14YIL176C 363 nt4.08□□□□□ -1.76
TY1B-JR1P47098 PAU1YJL223C 363 nt4.08□□□□□ -1.76
TY1B-JR1P47098 LAC1YKL008C 1257 nt4.08□□□□□ -1.76
TY1B-JR1P47098 YAR062WYAR062W 597 nt4.08□□□□□ -1.76
TY1B-JR1P47098 TDA11YHR159W 1515 nt4.08□□□□□ -1.76
TY1B-JR1P47098 TYR1YBR166C 1359 nt4.08□□□□□ -1.76
TY1B-JR1P47098 GSM1YJL103C 1857 nt4.07□□□□□ -1.76
TY1B-JR1P47098 YCR101CYCR101C 549 nt4.07□□□□□ -1.76
TY1B-JR1P47098 PHD1YKL043W 1101 nt4.07□□□□□ -1.76
TY1B-JR1P47098 FMP41YNL168C 780 nt4.07□□□□□ -1.76
TY1B-JR1P47098 TSR1YDL060W 2367 nt4.07□□□□□ -1.76
TY1B-JR1P47098 TRE2YOR256C 2430 nt4.07□□□□□ -1.76
TY1B-JR1P47098 YLR255CYLR255C 354 nt4.07□□□□□ -1.76
TY1B-JR1P47098 YML119WYML119W 1074 nt4.07□□□□□ -1.76
TY1B-JR1P47098 YMR082CYMR082C 357 nt4.07□□□□□ -1.76
TY1B-JR1P47098 YOR050CYOR050C 348 nt4.07□□□□□ -1.76
TY1B-JR1P47098 GCD6YDR211W 2139 nt4.06□□□□□ -1.76
TY1B-JR1P47098 BCK1YJL095W 4437 nt4.06□□□□□ -1.76
TY1B-JR1P47098 AUS1YOR011W 4185 nt4.06□□□□□ -1.76
TY1B-JR1P47098 DAP2YHR028C 2457 nt4.06□□□□□ -1.76
TY1B-JR1P47098 FCF1YDR339C 570 nt4.06□□□□□ -1.76
TY1B-JR1P47098 DGK1YOR311C 873 nt4.06□□□□□ -1.76
TY1B-JR1P47098 BEM4YPL161C 1902 nt4.06□□□□□ -1.76
TY1B-JR1P47098 PTR2YKR093W 1806 nt4.05□□□□□ -1.76
TY1B-JR1P47098 SSQ1YLR369W 1974 nt4.05□□□□□ -1.76
TY1B-JR1P47098 GRX6YDL010W 696 nt4.05□□□□□ -1.76
TY1B-JR1P47098 YBR141W-AYBR141W-A 96 nt4.05□□□□□ -1.76
TY1B-JR1P47098 RNT1YMR239C 1416 nt4.05□□□□□ -1.76
TY1B-JR1P47098 UBP15YMR304W 3693 nt4.05□□□□□ -1.76
TY1B-JR1P47098 VTC1YER072W 390 nt4.04□□□□□ -1.76
TY1B-JR1P47098 LDS2YOL047C 1071 nt4.04□□□□□ -1.76
TY1B-JR1P47098 YPL039WYPL039W 951 nt4.04□□□□□ -1.76
TY1B-JR1P47098 PRE2YPR103W 864 nt4.04□□□□□ -1.76
TY1B-JR1P47098 SPO71YDR104C 3738 nt4.04□□□□□ -1.76
TY1B-JR1P47098 MAF1YDR005C 1188 nt4.04□□□□□ -1.76
TY1B-JR1P47098 YIL163CYIL163C 354 nt4.04□□□□□ -1.76
TY1B-JR1P47098 YLL017WYLL017W 312 nt4.04□□□□□ -1.76
TY1B-JR1P47098 RPL33AYPL143W 324 nt4.04□□□□□ -1.76
TY1B-JR1P47098 FRE1YLR214W 2061 nt4.03□□□□□ -1.76
TY1B-JR1P47098 FUN12YAL035W 3009 nt4.03□□□□□ -1.76
TY1B-JR1P47098 YDL124WYDL124W 939 nt4.03□□□□□ -1.76
TY1B-JR1P47098 RIB5YBR256C 717 nt4.03□□□□□ -1.76
TY1B-JR1P47098 SEN1YLR430W 6696 nt4.02□□□□□ -1.77
TY1B-JR1P47098 URK1YNR012W 1506 nt4.02□□□□□ -1.77
TY1B-JR1P47098 PTI1YGR156W 1278 nt4.02□□□□□ -1.77
TY1B-JR1P47098 RBL2YOR265W 321 nt4.02□□□□□ -1.77
TY1B-JR1P47098 MBP1YDL056W 2502 nt4.02□□□□□ -1.77
TY1B-JR1P47098 YLR352WYLR352W 2424 nt4.02□□□□□ -1.77
TY1B-JR1P47098 TRK1YJL129C 3708 nt4.01□□□□□ -1.77
TY1B-JR1P47098 RIM4YHL024W 2142 nt4.01□□□□□ -1.77
TY1B-JR1P47098 SFH5YJL145W 885 nt4.01□□□□□ -1.77
TY1B-JR1P47098 YKR033CYKR033C 426 nt4.01□□□□□ -1.77
TY1B-JR1P47098 DGA1YOR245C 1257 nt4.01□□□□□ -1.77
TY1B-JR1P47098 MRPL37YBR268W 318 nt4.01□□□□□ -1.77
TY1B-JR1P47098 YDR061WYDR061W 1620 nt4□□□□□ -1.77
TY1B-JR1P47098 YIL102C-AYIL102C-A 228 nt4□□□□□ -1.77
TY1B-JR1P47098 MIC27YNL100W 705 nt4□□□□□ -1.77
TY1B-JR1P47098 CDC6YJL194W 1542 nt4□□□□□ -1.77
TY1B-JR1P47098 PMR1YGL167C 2853 nt4□□□□□ -1.77
TY1B-JR1P47098 RRD2YPL152W 1077 nt3.99□□□□□ -1.77
TY1B-JR1P47098 RSA1YPL193W 1146 nt3.99□□□□□ -1.77
TY1B-JR1P47098 PUT3YKL015W 2940 nt3.99□□□□□ -1.77
TY1B-JR1P47098 NPR3YHL023C 3441 nt3.99□□□□□ -1.77
TY1B-JR1P47098 MCA1YOR197W 1299 nt3.99□□□□□ -1.77
TY1B-JR1P47098 PSY1YKL076C 384 nt3.98□□□□□ -1.77
TY1B-JR1P47098 END3YNL084C 1050 nt3.98□□□□□ -1.77
TY1B-JR1P47098 SEO1YAL067C 1782 nt3.98□□□□□ -1.77
TY1B-JR1P47098 TCO89YPL180W 2400 nt3.97□□□□□ -1.77
TY1B-JR1P47098 YCR045W-AYCR045W-A 351 nt3.97□□□□□ -1.77
TY1B-JR1P47098 YBR242WYBR242W 717 nt3.97□□□□□ -1.77
TY1B-JR1P47098 APL5YPL195W 2799 nt3.96□□□□□ -1.77
TY1B-JR1P47098 MSB1YOR188W 3414 nt3.96□□□□□ -1.78
TY1B-JR1P47098 AXL1YPR122W 3627 nt3.96□□□□□ -1.78
TY1B-JR1P47098 IRC20YLR247C 4671 nt3.96□□□□□ -1.78
TY1B-JR1P47098 RPB8YOR224C 441 nt3.96□□□□□ -1.78
TY1B-JR1P47098 DIM1YPL266W 957 nt3.96□□□□□ -1.78
TY1B-JR1P47098 SWP1YMR149W 861 nt3.95□□□□□ -1.78
TY1B-JR1P47098 GAT2YMR136W 1683 nt3.95□□□□□ -1.78
TY1B-JR1P47098 RRP46YGR095C 672 nt3.94□□□□□ -1.78
Retrieved 100 of 7,029 protein–RNA pairs in 17.5 ms