Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC20.68■□□□□ 0.9
SSR2P43308 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SSR2P43308 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SSR2P43308 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.67■□□□□ 0.9
SSR2P43308 EDA-201ENST00000338901 1233 ntBASIC20.67■□□□□ 0.9
SSR2P43308 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
SSR2P43308 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.67■□□□□ 0.9
SSR2P43308 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC20.67■□□□□ 0.9
SSR2P43308 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC20.67■□□□□ 0.9
SSR2P43308 AC126544.1-201ENST00000580842 1059 ntBASIC20.67■□□□□ 0.9
SSR2P43308 AC008764.7-201ENST00000593779 1081 ntBASIC20.67■□□□□ 0.9
SSR2P43308 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.67■□□□□ 0.9
SSR2P43308 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SSR2P43308 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR2P43308 AC079834.2-201ENST00000609776 1949 ntBASIC20.66■□□□□ 0.9
SSR2P43308 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSR2P43308 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR2P43308 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SSR2P43308 AC079089.2-201ENST00000531211 1277 ntBASIC20.66■□□□□ 0.9
SSR2P43308 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 AC027682.1-201ENST00000562846 899 ntBASIC20.66■□□□□ 0.9
SSR2P43308 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 AC092053.2-201ENST00000640557 1818 ntBASIC20.66■□□□□ 0.9
SSR2P43308 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
SSR2P43308 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.66■□□□□ 0.9
SSR2P43308 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SSR2P43308 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SSR2P43308 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
SSR2P43308 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR2P43308 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.65■□□□□ 0.9
SSR2P43308 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR2P43308 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC20.65■□□□□ 0.9
SSR2P43308 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.65■□□□□ 0.9
SSR2P43308 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SSR2P43308 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SSR2P43308 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.64■□□□□ 0.9
SSR2P43308 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SSR2P43308 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR2P43308 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR2P43308 AC099791.1-201ENST00000416440 715 ntBASIC20.64■□□□□ 0.89
SSR2P43308 AP001330.3-201ENST00000520123 633 ntBASIC20.64■□□□□ 0.89
SSR2P43308 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SSR2P43308 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR2P43308 AL355001.2-201ENST00000620617 1191 ntBASIC20.64■□□□□ 0.89
SSR2P43308 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR2P43308 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SSR2P43308 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.64■□□□□ 0.89
SSR2P43308 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SSR2P43308 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.64■□□□□ 0.89
SSR2P43308 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR2P43308 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SSR2P43308 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR2P43308 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR2P43308 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR2P43308 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SSR2P43308 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.63■□□□□ 0.89
SSR2P43308 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSR2P43308 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SSR2P43308 OXCT2P1-201ENST00000447263 1535 ntBASIC20.63■□□□□ 0.89
SSR2P43308 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.63■□□□□ 0.89
SSR2P43308 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
SSR2P43308 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR2P43308 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SSR2P43308 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
SSR2P43308 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR2P43308 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR2P43308 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR2P43308 AF213884.3-201ENST00000563833 479 ntBASIC20.62■□□□□ 0.89
SSR2P43308 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR2P43308 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SSR2P43308 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR2P43308 STK25-234ENST00000535007 2459 ntTSL 2 BASIC20.62■□□□□ 0.89
SSR2P43308 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR2P43308 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SSR2P43308 OR7E47P-201ENST00000546390 1422 ntBASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms