Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SOX6P35712 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SOX6P35712 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.37■□□□□ 0.69
SOX6P35712 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.36■□□□□ 0.69
SOX6P35712 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SOX6P35712 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SOX6P35712 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SOX6P35712 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.36■□□□□ 0.69
SOX6P35712 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC19.36■□□□□ 0.69
SOX6P35712 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC19.36■□□□□ 0.69
SOX6P35712 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SOX6P35712 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC19.35■□□□□ 0.69
SOX6P35712 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
SOX6P35712 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
SOX6P35712 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.35■□□□□ 0.69
SOX6P35712 AC131274.2-201ENST00000580697 1507 ntBASIC19.35■□□□□ 0.69
SOX6P35712 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SOX6P35712 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
SOX6P35712 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SOX6P35712 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC19.34■□□□□ 0.69
SOX6P35712 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SOX6P35712 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC19.34■□□□□ 0.69
SOX6P35712 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
SOX6P35712 GOLGA2P6-201ENST00000340929 2049 ntBASIC19.34■□□□□ 0.69
SOX6P35712 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.34■□□□□ 0.69
SOX6P35712 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
SOX6P35712 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC19.34■□□□□ 0.69
SOX6P35712 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SOX6P35712 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
SOX6P35712 AC007952.6-201ENST00000573168 2673 ntBASIC19.33■□□□□ 0.69
SOX6P35712 AC003957.1-201ENST00000625108 2673 ntBASIC19.33■□□□□ 0.69
SOX6P35712 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
SOX6P35712 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX6P35712 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX6P35712 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SOX6P35712 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
SOX6P35712 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SOX6P35712 AL592295.1-201ENST00000400984 884 ntBASIC19.33■□□□□ 0.68
SOX6P35712 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC19.33■□□□□ 0.68
SOX6P35712 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.33■□□□□ 0.68
SOX6P35712 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.68
SOX6P35712 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
SOX6P35712 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SOX6P35712 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 Z98882.1-201ENST00000622160 2253 ntBASIC19.32■□□□□ 0.68
SOX6P35712 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SOX6P35712 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 AC007326.4-201ENST00000638240 1669 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SOX6P35712 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SOX6P35712 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
SOX6P35712 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SOX6P35712 TUB-203ENST00000534099 1759 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 RARG-204ENST00000543726 1779 ntTSL 2 BASIC19.32■□□□□ 0.68
SOX6P35712 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC19.31■□□□□ 0.68
SOX6P35712 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SOX6P35712 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms