Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC23.2■■□□□ 1.3
BRD2P25440 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.2■■□□□ 1.3
BRD2P25440 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC23.2■■□□□ 1.3
BRD2P25440 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC23.2■■□□□ 1.3
BRD2P25440 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC23.2■■□□□ 1.3
BRD2P25440 MAG-206ENST00000597035 542 ntTSL 4 BASIC23.2■■□□□ 1.3
BRD2P25440 AC233992.3-201ENST00000607491 485 ntBASIC23.2■■□□□ 1.3
BRD2P25440 RALB-208ENST00000631312 311 ntTSL 5 BASIC23.2■■□□□ 1.3
BRD2P25440 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
BRD2P25440 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
BRD2P25440 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 EDA-201ENST00000338901 1233 ntBASIC23.19■■□□□ 1.3
BRD2P25440 AF213884.3-201ENST00000563833 479 ntBASIC23.19■■□□□ 1.3
BRD2P25440 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC23.19■■□□□ 1.3
BRD2P25440 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC23.19■■□□□ 1.3
BRD2P25440 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
BRD2P25440 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
BRD2P25440 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
BRD2P25440 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
BRD2P25440 EP400NL-214ENST00000641289 2402 ntBASIC23.19■■□□□ 1.3
BRD2P25440 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC23.18■■□□□ 1.3
BRD2P25440 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC23.18■■□□□ 1.3
BRD2P25440 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.18■■□□□ 1.3
BRD2P25440 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC23.18■■□□□ 1.3
BRD2P25440 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 AC099791.1-201ENST00000416440 715 ntBASIC23.18■■□□□ 1.3
BRD2P25440 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 AL355001.2-201ENST00000620617 1191 ntBASIC23.18■■□□□ 1.3
BRD2P25440 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC23.18■■□□□ 1.3
BRD2P25440 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC23.18■■□□□ 1.3
BRD2P25440 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BRD2P25440 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
BRD2P25440 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
BRD2P25440 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.17■■□□□ 1.3
BRD2P25440 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BRD2P25440 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC23.17■■□□□ 1.3
BRD2P25440 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
BRD2P25440 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC23.17■■□□□ 1.3
BRD2P25440 AC068587.7-201ENST00000641602 218 ntBASIC23.17■■□□□ 1.3
BRD2P25440 AC139530.1-201ENST00000575312 1977 ntBASIC23.17■■□□□ 1.3
BRD2P25440 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
BRD2P25440 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC23.17■■□□□ 1.3
BRD2P25440 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC23.17■■□□□ 1.3
BRD2P25440 AC242852.2-201ENST00000615738 1807 ntBASIC23.17■■□□□ 1.3
BRD2P25440 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
BRD2P25440 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
BRD2P25440 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BRD2P25440 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BRD2P25440 AP005435.1-201ENST00000529293 1178 ntBASIC23.16■■□□□ 1.3
BRD2P25440 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
BRD2P25440 PALM-208ENST00000592155 2272 ntTSL 4 BASIC23.16■■□□□ 1.3
BRD2P25440 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
BRD2P25440 LSR-203ENST00000360798 1963 ntTSL 2 BASIC23.16■■□□□ 1.3
BRD2P25440 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
BRD2P25440 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
BRD2P25440 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD2P25440 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD2P25440 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD2P25440 MIR939-201ENST00000401314 82 ntBASIC23.15■■□□□ 1.3
BRD2P25440 AC010141.3-201ENST00000456659 717 ntBASIC23.15■■□□□ 1.3
BRD2P25440 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.15■■□□□ 1.3
BRD2P25440 AC027682.1-201ENST00000562846 899 ntBASIC23.15■■□□□ 1.3
BRD2P25440 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
BRD2P25440 AC126544.1-201ENST00000580842 1059 ntBASIC23.15■■□□□ 1.3
BRD2P25440 ECEL1P1-201ENST00000373592 1742 ntBASIC23.15■■□□□ 1.3
BRD2P25440 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
BRD2P25440 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
BRD2P25440 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC23.15■■□□□ 1.3
BRD2P25440 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC23.15■■□□□ 1.3
BRD2P25440 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC23.15■■□□□ 1.3
BRD2P25440 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC23.14■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms